| New model in OGS2.0 | DPOGS205117 |
|---|---|
| Genomic Position | scaffold5839:- 5800-6497 |
| See gene structure | |
| CDS Length | 459 |
| Paired RNAseq reads | 209 |
| Single RNAseq reads | 700 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005876 (1e-46) |
| Best Drosophila hit | Nidogen/entactin, isoform B (1e-21) |
| Best Human hit | nidogen-1 precursor (8e-14) |
| Best NR hit (blastp) | low density lipoprotein receptor [Bombyx mori] (7e-48) |
| Best NR hit (blastx) | low density lipoprotein receptor [Bombyx mori] (6e-49) |
| GeneOntology terms | GO:0005604 basement membrane GO:0008218 bioluminescence GO:0005509 calcium ion binding GO:0016020 membrane GO:0007160 cell-matrix adhesion GO:0018298 protein-chromophore linkage |
| InterPro families | IPR011042 Six-bladed beta-propeller, TolB-like IPR000033 LDLR class B repeat |
| Orthology group | ND |
Nucleotide sequence:
ATGGATGGTTCTCAGAGGGGTATCTTTTTGGACCAATCAGATGTAAAATTGCCAAACTCA
TTGGCCATAGATTGGTCTAGAGATAGACTGTGTTACTCCGACGCTGGGTTTGCTAGCATA
AAGTGCGTCGGTATAGATACCTTGGAAAAGGAAACCATAGCTGTGAATTGCTCGTATCCA
TTTGGTTTGGCCATCAGTGGAGATACTTACTACTGGACCGATTGGAAAACATTAAAAATC
GAGTCTATAGACAATTTGACGCAACTGAGAGGCCACGTTCCGATAGCTACTGCTTCAAGG
AGGTTGTATGGTGTTTCGGTTGCTCCGGACCAATGTCCAGCACAAAGTAACGTATGCCAG
GTTAGGAATGGAAACTGCGACCCTTACAACCTCTGTTTGCCCGACGGACAAGGCGGCAGG
ACTTGTGTCGCCGGAGACAACCTCCCAAATAACTACTAA
Protein sequence:
MDGSQRGIFLDQSDVKLPNSLAIDWSRDRLCYSDAGFASIKCVGIDTLEKETIAVNCSYP
FGLAISGDTYYWTDWKTLKIESIDNLTQLRGHVPIATASRRLYGVSVAPDQCPAQSNVCQ
VRNGNCDPYNLCLPDGQGGRTCVAGDNLPNNY