DPGLEAN07367 in OGS1.0

New model in OGS2.0DPOGS201540 
Genomic Positionscaffold3443:+ 16459-21972
See gene structure
CDS Length906
Paired RNAseq reads  579
Single RNAseq reads  2333
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002716 (8e-135)
Best Drosophila hit  CG5009 (1e-85)
Best Human hitperoxisomal acyl-coenzyme A oxidase 1 isoform a (1e-65)
Best NR hit (blastp)  PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (5e-112)
Best NR hit (blastx)  PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] (2e-109)
GeneOntology terms




  
GO:0016401 palmitoyl-CoA oxidase activity
GO:0055114 oxidation reduction
GO:0003995 acyl-CoA dehydrogenase activity
GO:0006635 fatty acid beta-oxidation
GO:0050660 FAD binding
GO:0005777 peroxisome
InterPro families


  
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR023570 Acyl-CoA oxidase, peroxisomal
IPR009100 Acyl-CoA dehydrogenase/oxidase
Orthology groupND

Nucleotide sequence:

ATGGTGTCTAATAAAATAAACGCCGATTTACAAAAAGAAAGGGATTCTTGTAGTTTTAAT
GTCACCGAATTAACAAACTTAATTGATGGAGGTATTGAGAAAACTGCCGAAAGGAAGAAA
AGAGAGGAAATGGCTCTCAAAGAAGGTATACATTTGGACGAAGTTCCGTCTGTGTATTTG
AGTCACAAGGAGAAATATGAGTTAGCGATCAAGAAAGCCTGCCTCCTGTTTAAAATGATA
AGACGACTTCAGGAAGAGGAAAATGCTGGCATGGAAAATTATATGGCAGTGCTTGGAGGT
AATTTAGGGTCGGCCATTCTTGGGGATGGATCCCCTCTCACCCTCCACTATGTAATGTTC
ATACCCACATTGATGGGACAGGGTACAGTGGAACAGCAGGCTTATTGGATCGGCAGAGCA
TTTAATCTTGACATCATTGGCACATACGCTCAGACTGAATTGGGTCATGGCACATTCGTC
CGCGGTCTTGAGACCACAGCCACCTACGATCCTTCTACTAAGGAGTTCATTCTACACAGC
CCCACACTCACCGCATACAAGTGGTGGCCAGGCGGACTGGCCCACACAGCCAACTACTGT
ATAGTTATGGCCCAACTGCACACGAAAGGCAAATGCCACGGCATGCACGCCTTCATAGTC
CAATTGCGTGATGAAGAAACACACATGCCCTTACCGGGGATTAAAGTTGGGGAGATCGGC
GCCAAGCTCGGTATGAACGGCACTAACAACGGATTCCTTGGCTTCGACCAAGTCAGAATA
CCCAGAGACTATATGCTAATGAAGAACGCTAAAGTTTTAGAGGTAATTATTTTTTTGTAC
CATAGTTTGAGGACGACCTTGATTTTTTTTCCGTTTTTTTTTTTTTGTACGCAATCATGC
AAATAA

Protein sequence:

MVSNKINADLQKERDSCSFNVTELTNLIDGGIEKTAERKKREEMALKEGIHLDEVPSVYL
SHKEKYELAIKKACLLFKMIRRLQEEENAGMENYMAVLGGNLGSAILGDGSPLTLHYVMF
IPTLMGQGTVEQQAYWIGRAFNLDIIGTYAQTELGHGTFVRGLETTATYDPSTKEFILHS
PTLTAYKWWPGGLAHTANYCIVMAQLHTKGKCHGMHAFIVQLRDEETHMPLPGIKVGEIG
AKLGMNGTNNGFLGFDQVRIPRDYMLMKNAKVLEVIIFLYHSLRTTLIFFPFFFFCTQSC
K