DPGLEAN07415 in OGS1.0

New model in OGS2.0DPOGS204318 
Genomic Positionscaffold10904:- 130-768
See gene structure
CDS Length369
Paired RNAseq reads  31
Single RNAseq reads  106
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA007587 (6e-22)
Best Drosophila hit  XPG-like endonuclease (4e-32)
Best Human hitflap endonuclease GEN homolog 1 (2e-20)
Best NR hit (blastp)  PREDICTED: similar to XPG-like endonuclease CG10670-PA [Tribolium castaneum] (5e-37)
Best NR hit (blastx)  PREDICTED: similar to XPG-like endonuclease CG10670-PA [Tribolium castaneum] (4e-35)
GeneOntology terms





  
GO:0000737 DNA catabolic process, endonucleolytic
GO:0000738 DNA catabolic process, exonucleolytic
GO:0004520 endodeoxyribonuclease activity
GO:0005634 nucleus
GO:0008310 single-stranded DNA specific 3'-5' exodeoxyribonuclease activity
GO:0008311 double-stranded DNA specific 3'-5' exodeoxyribonuclease activity
GO:0035312 5'-3' exodeoxyribonuclease activity
InterPro families
  
IPR006085 XPG N-terminal
IPR006084 DNA repair protein (XPGC)/yeast Rad
Orthology groupND

Nucleotide sequence:

ATGGGTATAAAGGGGTTATGGACGGTGTTAGCTCCATACTCTGAGAAGATATCATTACAC
GAAATTAGTGGTCAAACTGTTGCCATAGACTTAGCTGGATGGGTTTGTGATAGCCAAAAT
GTTACTGAGTATTATATTCAGCCTAAGCTCTATCTAAGAAATCTATTCTTCCGAACTCTT
TACTTAGTGCTAAGTGATGTAAATCCTATATTTGTGCTTGAGGGTGATGCTCCAGAACTT
AAGAGAGATGTTATGGCTGCTAGAAATGCATTGCAGTTTAAAGGTGCAGCCCCTAAAGCT
ACCACAGAGAAAACAAAACAAACTAACATAACAAGAACAAGGTTCAAAGGGGTATTAAAA
GAGGTATGA

Protein sequence:

MGIKGLWTVLAPYSEKISLHEISGQTVAIDLAGWVCDSQNVTEYYIQPKLYLRNLFFRTL
YLVLSDVNPIFVLEGDAPELKRDVMAARNALQFKGAAPKATTEKTKQTNITRTRFKGVLK
EV