New model in OGS2.0 | DPOGS201232  |
---|---|
Genomic Position | scaffold198:- 16087-19580 |
See gene structure | |
CDS Length | 1620 |
Paired RNAseq reads   | 575 |
Single RNAseq reads   | 1320 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012496 (3e-132) |
Best Drosophila hit   | origin recognition complex subunit 2 (2e-75) |
Best Human hit | origin recognition complex subunit 2 (5e-64) |
Best NR hit (blastp)   | origin recognition complex subunit 2 [Bombyx mori] (2e-141) |
Best NR hit (blastx)   | origin recognition complex subunit 2 [Bombyx mori] (5e-131) |
GeneOntology terms    | GO:0005664 nuclear origin of replication recognition complex GO:0006261 DNA-dependent DNA replication GO:0006260 DNA replication GO:0006270 DNA-dependent DNA replication initiation GO:0003677 DNA binding GO:0006342 chromatin silencing GO:0007307 eggshell chorion gene amplification GO:0007052 mitotic spindle organization GO:0007076 mitotic chromosome condensation GO:0030261 chromosome condensation GO:0008283 cell proliferation |
InterPro families   | IPR007220 Origin recognition complex, subunit 2 |
Orthology group | MCL13887 |
Nucleotide sequence:
ATGAATAGCGATGATATGAGTGAATCAGACAGTAAGCTCGCAACACCCGATTTTACACCG
AGAAGGGCTACAAGACATAGAACTAAACCGAAAAAATATGATGAGTACTTTGAATCGTCA
CCCACCAAAAGAAGAAGTTATAAAAATGTTGAAAGTTCAGATGAGGAAATAAACGAGGAA
CCGCTTTCCAAACCTAAAGCTTTATTCAGTAATGATGATGTCGAAGGCCAGGATATATTT
AGATTCAAGTCCCGACACACGAAACATGATCTCCAGAATAAAGTCAAAGCTGTTGTGGGA
AATGTTGCCCCGTCTCCCACGAAAACTCCAAAGAAAAATACACATTTATTACAAAAATTA
AATCATGGAAATGCACAGACACCCAAACATGTTGTGGACAAAATTAAGAAAAAAATAATA
GCCAAAGTTGAAAATAGTTCAGACAGTGACTATTCAGGCAGCAGTAGTGACTTTGTCCCC
GATAAAAGTGATGAGAGTTCCGAATCATCAGGGAGTGACTCGGATACTGGAAATGAGATA
GAGATGAAGACTTCAACGGGAGCTCAGGTCGCAAGGAACAAAAACAGAATGAAAACAAAA
GAGTCTGAATATTTTGTAAAATCTGATAACTATTTCATGATGAATTCAACTAAAAAAATA
ACAACATCGGACCATACATTGGCCAGGTTGAAGAATATGAACATACAGGAGGAGCAAAGC
CCCTGTGACTATGTGACACCCGAACATAGAATAAAGATCTCTGAACTGATAGAGACCTAT
GGACAGTTGTTCGACAAATGGCTGTTCGAATTAAACGAAGGCTTTAATATATTACTGTAC
GGAATAGGCTCCAAGAGGAATATCGTACAAAGATTCCAGGAAACGCTAAAAAGCACACCC
TGTATAGTGGTCAATGGTTTCTTTCCTAGTTTGACCATGAAAAATATCCTGGAGTGTATA
GTGATCGATCTGTTGGACGATAGCCACGTGTCTTCTAACATGGGGGACGTGTTGTGCGTC
ATAGAGACTCGGCTACGGGACTTGGACACATATTTATTGGTTGTTGTACATAACATTGAT
GGTGTGATGTTGAGGAGCGGCAAGTGTCAAGCTGCGCTGGCTGGGCTGGCTGCTTTGGAA
CACGTGAAGCTGGTAGCCACCATCGACCACATCAATGCGCCTTTGTTATGGGATCACAGT
AAGCTGAGTAAGTACAAGTTTCTGTACTACGACGTGACGTCATTCCTGCCGTACGAGCAC
GAGGCGCCGGGCGTCGCGCACACCCATCAAGCCGGCGGGCTGCAGCTGGCGGCGCTTAAC
AGTGTGTATAGATCACTCACCAACAACGCTAAGGGAATATTCAATATCATAGTGGAATAT
CAGCTGCAGAACCACAAACAGTCTCACTACCAAGGCGTGCCGCTCAAGGAGTTATACTCC
CTGGCCCGCGAGCGTTTCCTGTGCAGCTCGGATGCTGTGTTGAGAGCTCATCTCACGGAG
TTCATAGATCACCGGCTGATGAGGATCAAGAGGGCGGACGACGGTGATTACGTTAAGGTG
TTGTTGGACACCGAGGTGCTTAGAGGATTCACTCACACGCTGCTAGACACGGGGACATGA
Protein sequence:
MNSDDMSESDSKLATPDFTPRRATRHRTKPKKYDEYFESSPTKRRSYKNVESSDEEINEE
PLSKPKALFSNDDVEGQDIFRFKSRHTKHDLQNKVKAVVGNVAPSPTKTPKKNTHLLQKL
NHGNAQTPKHVVDKIKKKIIAKVENSSDSDYSGSSSDFVPDKSDESSESSGSDSDTGNEI
EMKTSTGAQVARNKNRMKTKESEYFVKSDNYFMMNSTKKITTSDHTLARLKNMNIQEEQS
PCDYVTPEHRIKISELIETYGQLFDKWLFELNEGFNILLYGIGSKRNIVQRFQETLKSTP
CIVVNGFFPSLTMKNILECIVIDLLDDSHVSSNMGDVLCVIETRLRDLDTYLLVVVHNID
GVMLRSGKCQAALAGLAALEHVKLVATIDHINAPLLWDHSKLSKYKFLYYDVTSFLPYEH
EAPGVAHTHQAGGLQLAALNSVYRSLTNNAKGIFNIIVEYQLQNHKQSHYQGVPLKELYS
LARERFLCSSDAVLRAHLTEFIDHRLMRIKRADDGDYVKVLLDTEVLRGFTHTLLDTGT