| Genomic Position | scaffold2045:- 27745-28562 |
|---|---|
| See gene structure | |
| CDS Length | 729 |
| Paired RNAseq reads | 2 |
| Single RNAseq reads | 8 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (7e-12) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (3e-11) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL19906 |
Nucleotide sequence:
ATGTCAGACTCATATCGATTGGAATGTGGAGTGAGGCAGGGGGGAATAACCTCGCCTAAG
CTGTTCAACCTTTACGTAAACGAACTAATAGTGGGACTTAGCAGCAAACCAGTCGGATGC
TGGATAGACGGCGTGTGTGTCAATAACCTTAGTTACGCAGACGACATGGTTCTGCTGGGT
CCTACGGCTGGTTCTATTAGGTGTCTCTTAAAGATTTATGAGAAATATGCATTAAAACAT
GGCCTTACGTACAATGTCAATAAAAGTGAGTACATGGTCTTTGGGATCCGTGGAAGGGTA
ATCGACTACAAACCGGTTTTAAAACTAAATGAGAAACAGTTAAGTCAGGTTAAAGTATTT
AAATATCTCGGTCAATACATTTTCGAGGATCTCAGAGACCATGCAGATATTGAACGTGAA
CGAAGAGCACTTGCCGCCAAATGTATGCTTGCCCACAGCAAGAAAGCACTAGACACACTG
AGAGTGCAATATAATAATGGATTCAGAGTTTTGTTGGGACTTGGACGCTTCTGTAGCGCG
TCCGCCATGTTCGCCGAGGCGGGTACAGATGACTTCTTTTCTATAATAAGAAAAAGGACT
GCATCTCTACTTAATATAATGCGATCAAGTCCCAACAGGATTCTGAAAATGTTCAGTGCC
AAGCTGGCCGAGCCTGCGCTTCAGTACTTTGTCAACGTGCTGGTGAGGCAGGTTAGGCTA
AGCAAATAA
Protein sequence:
MSDSYRLECGVRQGGITSPKLFNLYVNELIVGLSSKPVGCWIDGVCVNNLSYADDMVLLG
PTAGSIRCLLKIYEKYALKHGLTYNVNKSEYMVFGIRGRVIDYKPVLKLNEKQLSQVKVF
KYLGQYIFEDLRDHADIERERRALAAKCMLAHSKKALDTLRVQYNNGFRVLLGLGRFCSA
SAMFAEAGTDDFFSIIRKRTASLLNIMRSSPNRILKMFSAKLAEPALQYFVNVLVRQVRL
SK