| New model in OGS2.0 | DPOGS211032 |
|---|---|
| Genomic Position | scaffold8934:- 483-3973 |
| See gene structure | |
| CDS Length | 405 |
| Paired RNAseq reads | 236 |
| Single RNAseq reads | 1961 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011308 (8e-69) |
| Best Drosophila hit | CG3902 (2e-49) |
| Best Human hit | short/branched chain specific acyl-CoA dehydrogenase, mitochondrial precursor (3e-50) |
| Best NR hit (blastp) | acyl-coenzyme A dehydrogenase [Bombyx mori] (8e-70) |
| Best NR hit (blastx) | acyl-coenzyme A dehydrogenase [Bombyx mori] (9e-67) |
| GeneOntology terms | GO:0003995 acyl-CoA dehydrogenase activity GO:0005739 mitochondrion GO:0005759 mitochondrial matrix GO:0006629 lipid metabolic process GO:0006631 fatty acid metabolic process GO:0006635 fatty acid beta-oxidation GO:0006637 acyl-CoA metabolic process GO:0009055 electron carrier activity GO:0016937 short-branched-chain-acyl-CoA dehydrogenase activity GO:0050660 FAD binding GO:0055114 oxidation reduction |
| InterPro families | IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1 IPR006089 Acyl-CoA dehydrogenase, conserved site |
| Orthology group | ND |
Nucleotide sequence:
ATGATCGGCCTCAGCCAGGGCTGCATGGACGCGACCATACCTTACACACTCGAGAGGAAA
CAGTTCGGGAAGAAGATATACGACTTCCAGGGTATCAGCTACCAGATCGCACACCTTCAG
ACTCAGCTTGAGGCGGCTCGTCTCCTCACATACAACGCTGCCAGGCTCAAGGAAAACGGA
ATGGACTTCGTCAAAGAAGCCGCTATGGCAAAATACTTTGCTTCAGAAATCGCTCAAACC
CTGACATCGAAATGCATAGACTTCATGGGAGGTGTCGGCTTCACTCGTGACTTTCCTCAG
GAGAAGTTCTTCAGGGATGCAAAAATTGGAACAATCTATGAAGGCACCAGTAATATGCAG
CTACAGACTATAGCCAAGCTCATTGAAAGACAGTACACACAATAA
Protein sequence:
MIGLSQGCMDATIPYTLERKQFGKKIYDFQGISYQIAHLQTQLEAARLLTYNAARLKENG
MDFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFFRDAKIGTIYEGTSNMQ
LQTIAKLIERQYTQ