New model in OGS2.0 | DPOGS207428  |
---|---|
Genomic Position | scaffold1225:+ 49254-78543 |
See gene structure | |
CDS Length | 3462 |
Paired RNAseq reads   | 1994 |
Single RNAseq reads   | 5193 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009327 (2e-84) |
Best Drosophila hit   | RhoGAP102A, isoform C (6e-38) |
Best Human hit | rho GTPase-activating protein 6 isoform 3 (9e-30) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC008395 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC008395 [Tribolium castaneum] (6e-78) |
GeneOntology terms    | GO:0005100 Rho GTPase activator activity GO:0005622 intracellular GO:0007165 signal transduction |
InterPro families    | IPR000198 Rho GTPase-activating protein domain IPR008936 Rho GTPase activation protein |
Orthology group | MCL17483 |
Nucleotide sequence:
ATGGAGCGCCGCCGGCCCGCGCGCCTCGACCTCGCCGACCCCATGACCAAGACCGTGCGG
CGCCGCGACCGCCCGCGAGAGAGATGGCTCCTCACTCGCAAGACCTGGAAGTACATGTCC
GATGCCGGTCGCCGGCTCATCCCAGACGGCGCCCAGAACCGCGCGGACGACGTGCCGCGG
ATCGAGGCCTACTTCCAGGAGGTGTGCCAGCGGGAGCCGCGGTTTTTGCTGTGGAGAAAG
AGCTCTTACCCGGGAGTGCTGCCGAAACCCCGACGCAAAAAGAGAGCGCGCGGTGGTTCT
GTGAGGGCACGTTCGCCTTCGGATGACGCTCCGCCTCCACCCACGAGGCCCACCGATCTC
TATATTCCTCACACCTCGGGTGGCCGCTTTGATATCGCTAAGCTACGGCGAGATTTTTTC
GCAGCGCCTCCTCCTTCTCCGTCCTCCACTGGATTTCCTTCAGTCAGTGCTACTTTTAAT
ACTAATAATAGTGCTATTAAGAATGGATGCCCGCATCCGTCTATTTCTGAGGATGATGAA
GGAATTTTAGTAGATTTACTACGTAAGTACCTGAAAGTTGAAGATGCTAGGGATCCACCT
CGTGTGTCAGAGTCTGAGGAACTTATCCGAGCTCTGCGTGACTACCTCAAACGTCTGTCG
GAACGTGAGCCTACAGATTCCGATACAGATCCCACGCGAAGAATTCTCCGTGAAAACCTC
GGTAGGTACTACCTCCGTTCTTCCAATAGAGACAATACAGTGCAAGATTTATTGAACGAT
AAAAATTTGTTGAAAAACCTGTACCATGACCTTCGTAAACCGAAGCCTTATCGTGGTGGC
AGGAGTGGCGGTGGTCCGAGTTCGCTCGGGTCTAGTAGTGGGTTTAGTGCATCTAGTTCA
CGTAGCGTGTTTTTTGGCCGAAATTTTGGTGGTTCAAAGTTTAACGATGAGAACTGTTCA
TCACCACCAATGTCTCCTCCACCTCTTATTGAAGTTTACGGCGAATCGATGGAGGATAAA
CTCGTCGACGTTGGAACGCAAACACTTCCTATACCTGAGGAGGTATTACAGGAGCAGGAA
CGAAGTTATAGAGAAAAGTTGGAAGCCGCTACGGCCCCAACGAGTCCAACGAGTCCACCT
CCCGAGAGAAGACCTCGGCGACGTTCCAGCGTGGACCACGACGACGTCTCACAATCAGTC
AGCGACACCATCAAGCGGTATTTGAGGATGGCGCGCAAAAAGAGCGTAGACGCTGAAAAG
ACTGATCGCTTCAAGCGTATAAACTATGATAAAAACTTACGCAACATAAAACCTCGTCAG
CAGGGTGACGTTGACGACGACGGGCCTCACAAGGGATGTCAAACAGATGAGGCTTGGATA
TTAACGTACAGAGATTTACAATTCGCGTCTGTAGCATCGACCCCGACCTCTCCTCCGTCC
CCGTCTCAGTCGCACTCTTTTCTGTCAACCCTTTTGGGTCGAAATGCATCAATGGCTCCT
AATGCAGGTGGCATGCAAAAGTCTCGGTCTTCGAGCAGCGTGGTCCAGAGCGTCAGTAAG
CGACTCTGGCGCACGAGGAGCCGGTCTTCGAGCCGCGTCGCAGCATCATGGACGCCTCAG
GGCAGTTGTTGCTGGACAGACGGCGCCGGGCGCTGCGTGAAGCTGACGGACACCTCGCTG
CTGTCTCTCACGGAGGTGGAGAGGAGGGCGCTACAGCAGGCGGCACTGGCCAGGCTGCAG
CAGCTCAACCTTGGAACTACTATTAAGATACCTGAGGATAACACGTCGACAGTAGCGACT
AAGCCGAAGCGCCGCGCCTACCTTCTGAAAAGGAAGGCGCTCACCACTGGCTTCTTCGAC
CAGCGACCCAAGGACGCTGAGAAGGAGAAAGAGTCCACGGGCAGCGTTTTCGGCGTGCCG
TTGTCTCAATGTGTGGAAACAGAACGAGCTCTGAGGAGACAACATGGAGGTTCCAGGGCG
TCTCTGGCTTCCATTGGAGGCTTGGAGAAAGGAGACGATAGTGAATCGTGTGACTCCGGT
GAGTGGGGCTGGTCAGGGGTGGACGAGGGCAACGGAGGGCCGAAGGTCCCCGCGTTAGTA
TCTTCTTGTCTGTCCCACCTCCGAAGGCACGGTCTCGACACACTCGGGCTCTTCAGAGTG
TCCGCCTCTAAGAAGAGAGTGAGACAGCTCCGCGAGGAGTGGGAGCGAGGTCAGGAGGCA
GCTCTAGACGCGGCAGTATGCCCCCACGACGTAGCCACTTTATTGAAGGAATTCCTCAGG
GATTTACCAGATCCATTGCTATGCAGGGATCTATATCCCGCATTTCTACAGACTCAAAAG
ATCCGTAACCGTCGTCTTCAGTGGGAGGCGCTCCGTCTGATCGTCCAGCTCTTGCCGGCG
GCTCATCGCGACACTCTCAGCGCACTGCTCGCGTTCCTCTCGCAGCTGGCATCACACGCG
GGGGACGAAGACACCCCCGGCAACAAGATGAATGCCGCTAACCTGGCCACCATCTTCGCA
CCCAATATACTGCATAAGAACAAACCCAACGAGACCGCGAGTGCGGAGCAGTTGTCGGAG
AGAGCTGACGTCATCAACGTGGTCCGCACCTTGGTGGAGCGACAGAGTGAGCTTTGGTCG
CTGCCGGCGGAACTGTTACATGAGGCCTACATTCATCTCGCACACCACGCACCGGCAGGG
CTTGACGCACTGCTGCTTAGGAGGGCAGAAACAGCAGCAGAAAATGAAAAGGCCAATGCA
GAGGGCGCCAAACGTCTTTGGTCTCGTGAAAGCTTCCTCCACGCGGCTGCCAACACTGTC
CCCGCTGTCTCCAGCAGGAGTAGTGTGACGGAGGGCGGGCGGGCGAGAGACTCGGACGCC
TCCTCCGCATCACTGTCTTCTGCCGTTATGCTCATGACCAGGTTACGCAGCAGCGAGGAA
CGCGCCAGCAGCGGGGTGGTGAGCGGTCACAGGGACTCCGCCCCGGACTCCAACGACTCC
AGCGACTACAACGAGGTGGGCGGTGTGTCGGAGGACGAGCTGGTGATCACGGCGTCGCTC
CACATCCCGGCGCTCCGGCGTCGCTCCGTGTCCTCGTCCAAGCGGGACTCGGCGGTGGGC
TCGTCGTCGTCAGCGGCGTCTCCGTCGTCGTGCTCGCCGCCTTCCTCTCCGCCGCCCCGA
CCGGCGCGGGACATCGACCGCCTCGTGGGCCTCTCGCGTGAACGGAACACTTCCGACTCC
CGCGCGGCGGTCGTTGGCAGAACTCACGAAGAAGTGACAGTTTCAAGAAGCACACGCGTG
TCCAGACAGGAGCACACCGTACGGCGAGAAGAAGTCATCAGGAGAGAAGACCAGAACACG
AGGAAAGAAGATCACAACGCCAGAAGAGAAGACAAAAGAGAAGGGACGATGCTTTACAAA
AGAGGCGAACTCATCTCAAGCGCGAGGACGCCGCCCGCATGA
Protein sequence:
MERRRPARLDLADPMTKTVRRRDRPRERWLLTRKTWKYMSDAGRRLIPDGAQNRADDVPR
IEAYFQEVCQREPRFLLWRKSSYPGVLPKPRRKKRARGGSVRARSPSDDAPPPPTRPTDL
YIPHTSGGRFDIAKLRRDFFAAPPPSPSSTGFPSVSATFNTNNSAIKNGCPHPSISEDDE
GILVDLLRKYLKVEDARDPPRVSESEELIRALRDYLKRLSEREPTDSDTDPTRRILRENL
GRYYLRSSNRDNTVQDLLNDKNLLKNLYHDLRKPKPYRGGRSGGGPSSLGSSSGFSASSS
RSVFFGRNFGGSKFNDENCSSPPMSPPPLIEVYGESMEDKLVDVGTQTLPIPEEVLQEQE
RSYREKLEAATAPTSPTSPPPERRPRRRSSVDHDDVSQSVSDTIKRYLRMARKKSVDAEK
TDRFKRINYDKNLRNIKPRQQGDVDDDGPHKGCQTDEAWILTYRDLQFASVASTPTSPPS
PSQSHSFLSTLLGRNASMAPNAGGMQKSRSSSSVVQSVSKRLWRTRSRSSSRVAASWTPQ
GSCCWTDGAGRCVKLTDTSLLSLTEVERRALQQAALARLQQLNLGTTIKIPEDNTSTVAT
KPKRRAYLLKRKALTTGFFDQRPKDAEKEKESTGSVFGVPLSQCVETERALRRQHGGSRA
SLASIGGLEKGDDSESCDSGEWGWSGVDEGNGGPKVPALVSSCLSHLRRHGLDTLGLFRV
SASKKRVRQLREEWERGQEAALDAAVCPHDVATLLKEFLRDLPDPLLCRDLYPAFLQTQK
IRNRRLQWEALRLIVQLLPAAHRDTLSALLAFLSQLASHAGDEDTPGNKMNAANLATIFA
PNILHKNKPNETASAEQLSERADVINVVRTLVERQSELWSLPAELLHEAYIHLAHHAPAG
LDALLLRRAETAAENEKANAEGAKRLWSRESFLHAAANTVPAVSSRSSVTEGGRARDSDA
SSASLSSAVMLMTRLRSSEERASSGVVSGHRDSAPDSNDSSDYNEVGGVSEDELVITASL
HIPALRRRSVSSSKRDSAVGSSSSAASPSSCSPPSSPPPRPARDIDRLVGLSRERNTSDS
RAAVVGRTHEEVTVSRSTRVSRQEHTVRREEVIRREDQNTRKEDHNARREDKREGTMLYK
RGELISSARTPPA