| New model in OGS2.0 | DPOGS207981 |
|---|---|
| Genomic Position | scaffold3544:+ 8887-9926 |
| See gene structure | |
| CDS Length | 714 |
| Paired RNAseq reads | 519 |
| Single RNAseq reads | 2217 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000333 (8e-31) |
| Best Drosophila hit | cuticular protein 65Eb (2e-14) |
| Best Human hit | ND |
| Best NR hit (blastp) | larval cuticle protein LCP-22 precursor [Bombyx mori] (2e-33) |
| Best NR hit (blastx) | larval cuticle protein LCP-22 precursor [Bombyx mori] (5e-32) |
| GeneOntology terms | GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | MCL23526 |
Nucleotide sequence:
ATGAGATTCGCCGTGGTCGTATTTGCCTGCGTATTGGCGGCCGTCAGTGCCCAACAATAC
TTCCCTCAGAACAAGGGACAATACTTCCCTCAGAACGACCAATACAATTACAACAGATAC
AATAAGTTCAACTACAACAACAACTACAACCGTTACCCCAACCAGAACAGATGGGGTGGC
AACTACCAGCCCTTCGTACAGCCCACTCCTTTCCCCCGTCCAGTTGTACCTGTTAAGCCC
GTAGTTGTAACCCCTGCTCCGGCTGTTTCTGTTGAAGCCAAACCCAGCCCTGCTCCCGTT
CAGGTGCCCGTAGTTCCACAAGTAGTCGTTTCTGAACCAAAACCCTCTCCAGTAGTCCCC
GTATCTTCTGTCAGAGTTGCCGCTGACGACCGATCTGCTGAAGTCCTTAAATTCGGAAAT
GAAATCAGTGAAAACGGTTTCAACTACTACTTCGAAAGCAACAACGGAATCGCCGCTCAA
GCTCAAGGTGTTCCCCGCAACTTCGGTGGAAACCCTCCCGTAGTTCCTGATGTTATCCAA
GGTGCTTTCTCCTGGATTTCCCCCGAAGGCAAGGTCATCTCTATAAGCTATACCGCCGAT
GAGAACGGATACCAACCCTCAGGAGACGCCATTCCCCAACCCCCAGAAGTCCCCGCCCAG
ATCGCACGCGCCCTTGAATACAGTGCCAGATACCTCGCTGGTGCCAAAAACTAA
Protein sequence:
MRFAVVVFACVLAAVSAQQYFPQNKGQYFPQNDQYNYNRYNKFNYNNNYNRYPNQNRWGG
NYQPFVQPTPFPRPVVPVKPVVVTPAPAVSVEAKPSPAPVQVPVVPQVVVSEPKPSPVVP
VSSVRVAADDRSAEVLKFGNEISENGFNYYFESNNGIAAQAQGVPRNFGGNPPVVPDVIQ
GAFSWISPEGKVISISYTADENGYQPSGDAIPQPPEVPAQIARALEYSARYLAGAKN