New model in OGS2.0 | DPOGS201279  |
---|---|
Genomic Position | scaffold1837:- 31725-36320 |
See gene structure | |
CDS Length | 906 |
Paired RNAseq reads   | 408 |
Single RNAseq reads   | 1745 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003032 (1e-143) |
Best Drosophila hit   | CG10237, isoform B (2e-115) |
Best Human hit | clavesin-1 (3e-32) |
Best NR hit (blastp)   | conserved hypothetical protein [Pediculus humanus corporis] (6e-127) |
Best NR hit (blastx)   | conserved hypothetical protein [Pediculus humanus corporis] (2e-127) |
GeneOntology terms    | GO:0016918 retinal binding GO:0008431 vitamin E binding GO:0005622 intracellular GO:0005215 transporter activity GO:0006810 transport |
InterPro families    | IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
Orthology group | MCL16030 |
Nucleotide sequence:
ATGTTGTCCGATGTGAGCACACTGCCTTGTGTGCAACTTGGTGACTATCTTCTACAATTT
GAGCTTGAAGAGCCAAAAGAATCTGTCCGAGAAATAGCTAGACGCGAACTCCGAGAGACG
CCAGACATCGTGAAACCAGCGGTTGAGGAACTGAGGAGCCTCCTCGAAGCCGACAAAGAC
CTATGGGTTCCCGTCGAAAACGACGCTTGGCTCATCAGGTTCCTACGACCCTGCAAATTC
TATCCTGAAAGTGCATATGATTTAATAAAGAGATACTATGCGTTCAAAGTAAAACACAGC
AAGCATTACGAGGGTCTGACTCCCAGTCAAGAGCAAAATGTGTTCAAACAGAACGTTCTA
CGTGTTCTGCCAAACAGAGACCAGCTGGGACGGAGAGTTCTCGTACTGGAACTCGGGAAA
AAATGGAACCACAACAAATGCTCGCTGGATGAAGTGTTCAAGGGCTGCGTTTTGTTCCTC
GAGGCGGCCATGTTGGAGCCTGAGACGCAGGTCTGTGGGGCCGTCGTCATCTTTGACATG
GATGGACTCTCGCTGCAGCAAGTCTGGCAGTTCACGCCGCAGTTCGCAAAGAGAATTGTC
GACTGGTTACAGGAAAGCATACCGCTCCGTATCAAAGGTTTCTACATAATCAACCAGCCA
TACATCTTCAATATGGTGTTCCAACTCTTCAAGCCCCTGCTGAAGGAGAAACTGCGGTCG
CGTATCGTTTTCATGGGCAGTGACAGGGAGATGCTCTATAAATATATAAGCCCCAAATGT
TTGCCAGATTGCTATGGAGGAACTTTGACCATACCTAATGTTTCTGGACCCCAATGGTTG
GAACTGCTCCTGATATGTGATAAGGAGTTTATAGCTATCAATTCGTATGGGTATAAGAAA
AAGTAG
Protein sequence:
MLSDVSTLPCVQLGDYLLQFELEEPKESVREIARRELRETPDIVKPAVEELRSLLEADKD
LWVPVENDAWLIRFLRPCKFYPESAYDLIKRYYAFKVKHSKHYEGLTPSQEQNVFKQNVL
RVLPNRDQLGRRVLVLELGKKWNHNKCSLDEVFKGCVLFLEAAMLEPETQVCGAVVIFDM
DGLSLQQVWQFTPQFAKRIVDWLQESIPLRIKGFYIINQPYIFNMVFQLFKPLLKEKLRS
RIVFMGSDREMLYKYISPKCLPDCYGGTLTIPNVSGPQWLELLLICDKEFIAINSYGYKK
K