| New model in OGS2.0 | DPOGS211621 |
|---|---|
| Genomic Position | scaffold377:- 34921-36566 |
| See gene structure | |
| CDS Length | 999 |
| Paired RNAseq reads | 4 |
| Single RNAseq reads | 22 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008576 (7e-125) |
| Best Drosophila hit | connectin (1e-32) |
| Best Human hit | leucine-rich repeat neuronal 6A (5e-18) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (7e-52) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (3e-55) |
| GeneOntology terms | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0016200 synaptic target attraction GO:0007413 axonal fasciculation GO:0007156 homophilic cell adhesion |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL11975 |
Nucleotide sequence:
ATGATATTAGAACTTGTTCGTGATTCTTTTATTGATGTACCAAAATTACAGAAATTAACA
TTTACTAAAAACAATATTTCGACCATAAGCAATGGAGCGTTTCAACACACCTTTAATCTT
CTGGAATTGGACTTAAATAGGAATAATATTTTTCACTTAAATCGACACACGTTTGATGGA
TTGGCGAACTTAAAGAAATTAGATCTAAGAAGGAATCACATTTACAATTTGACTGAATTT
ACTTTCGCTGAGCTTTGGAATTTACAAGAGTTGCTTTTGGGAAAGAATGATTTAAAATAT
ATATCAGAGAGAGCTTTTGACGGGTTGTCACAACTAAGAAAGTTGTCCCTGGATGATAAT
AAGCTGGCTTCACTTCCCGCCGGCTTGTTTGAGGGTGTGCGAGGGTTAAGCTCCTTAGAC
TTGCGTTCTAATGAATTGCATGCATTAACTTTCGATAACATCAAGCCTATTTTGGATAAT
CTAAAGCCAACAGGCAGCAATCTGTTACTAGAAGAAAACAACTTTGTTTGCGACTGTCGG
CTCAAATGGATGCATTCACTCCGTAATGAAACACAAAGCCAAAATACAAAGGATTCCCTA
GAGGGTGTTACTTGTAAGATGGACCCGCCAATCGTTAGCTCCGCGTATAATAAAATGCCA
GAAGAAAGTCTTAATATAAACAAGGACAATTCTCTTACGAACATAATAATAGAGACAGTA
AAGAAAACGAATTCAACAGAAAAGAAAGATATGACTATTGATATTAATGGCAAGAAAGGT
GTTAAGAGAAATGTATTAAAGATACCACCGGAAACTCTGCCCTGCCCTGTCGAAACAAAG
AAGACAACCCAATTACCGGCATTTATAGCGGATCCCGTTATACCGATTCAAAACGAGATG
AAAACATTTCGGTTTCATGAGATGAATGCCGCTACTAAGGTCTCATTTGTACACAGCATT
GTTTTATGGAATATTTTCTTTATCTTCTTCTTCACTTAG
Protein sequence:
MILELVRDSFIDVPKLQKLTFTKNNISTISNGAFQHTFNLLELDLNRNNIFHLNRHTFDG
LANLKKLDLRRNHIYNLTEFTFAELWNLQELLLGKNDLKYISERAFDGLSQLRKLSLDDN
KLASLPAGLFEGVRGLSSLDLRSNELHALTFDNIKPILDNLKPTGSNLLLEENNFVCDCR
LKWMHSLRNETQSQNTKDSLEGVTCKMDPPIVSSAYNKMPEESLNINKDNSLTNIIIETV
KKTNSTEKKDMTIDINGKKGVKRNVLKIPPETLPCPVETKKTTQLPAFIADPVIPIQNEM
KTFRFHEMNAATKVSFVHSIVLWNIFFIFFFT