| New model in OGS2.0 | DPOGS204880 |
|---|---|
| Genomic Position | scaffold1191:+ 6820-8576 |
| See gene structure | |
| CDS Length | 1425 |
| Paired RNAseq reads | 1129 |
| Single RNAseq reads | 3631 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011770 (0.0) |
| Best Drosophila hit | COP9 complex homolog subunit 1 b (2e-173) |
| Best Human hit | COP9 signalosome complex subunit 1 isoform 1 (5e-178) |
| Best NR hit (blastp) | G protein pathway suppressor 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | G protein pathway suppressor 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
| InterPro families | IPR019585 26S proteasome, regulatory subunit Rpn7 IPR000717 Proteasome component (PCI) domain IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL12152 |
Nucleotide sequence:
ATGCAAGTGGACGTTCCCCTTGAAGATAACGAGAACAATGAAACGGAATGCTATGTTGTT
GATAACCCTACCTTGGACTTAGAGACTTATGCTGCGTCTTACACTGGCTTTGCTAAATTG
TACAGATTAATGTTTGTAGCAGATCATTGTCCATCATTGAGATTAGAAGCTCTAAAAATG
GCTATATCCTATGTTATGACCACCTATAATGTAAGTCTTTATCAAACACTTCACAAAAAA
CTTGCTGAAGCTGTAGCAACTGTAGGTCTACCAGATGTTGCAGTACAGATGGGTTCACAG
GATATTCCTGTGCTTGATTCTATGTGGGTAGAATCTAAAACCAAAAAGGCTGCCATCAAG
TTGGAAAAATTAGATACTGACCTTAAAAATTATAAAACTAATTCTATTAAGGAGAGCATA
AGACGGGGCCATGATGACCTTGGTGATCATTACTTGGATTGTGGCGATCTCACTAGCGCT
CTCAAATGTTACTCTAGAGCTAGAGATTATTGCACAAGCGGCAAACATATAATAATGATG
TGCCTCAATGTAGTTAAAGTTTCAGTGTATTTGCAAAACTGGGCTCATGTTTTGAATTAT
GTATCAAAGGCTGAAGGAACTCCAGATTTTAATGAAGTTCCTGGAAAGGATTCCAACCAA
TCCATACTAACCCGCTTAAAATGTGCCGCCGGTTTAGCAGAGTTGGCTACCAAAAAGTAT
AAATCAGCTGCAAAACATTTCCTAGCAGCCAGCATTGATCATTGCGACTATCCAGAATTG
CTCAGCAGTAACAATGTAGCAGTCTATGGTGGGCTCTGTGCATTAGCAACATTTGATCGC
TCCGAACTTCAAAAACAAGTTATAGTTAGCAGTTCTTTTAAATTATTCTTAGAACTAGAA
CCACAATTACGGGACATAATTTTTAAATTTTATGAATCAAAGTACGCTTCTTGCTTAAGG
TTACTGGACGAAATCCGGGACAATCTTCTGCTTGATATGTATTTGGCCCCACATTTAAAT
TCTTTGTATATGCAAATTCGCAACCGAGCCTTAATTCAATACTTCAGTCCATATCTCTCT
GCCGATATGCATCTTATGGCAGCGGCGTTTAACCGTACAGTGAATGCTCTGGAGGATGAG
CTTATGCAACTAATTCTTGATGGACAAATACAAGCACGTATTGATTCTCACAATAAAATA
CTCTACGCCAAGGATGTTGATCAAAGGAGCACTACTTTTGAGAGAAGTCTAGCGATGGGG
AAAGAATACCAGAGAAGAACGTCTATGTTAATCCTCCGTGCTGCTTTGCTCAAAAATCAC
ATTCATGTTAAGATTGTTGGCCGCGAGCCTGGTCCGCAGAGTGGCGAAGCGCCCGGGTCT
AGTACCAGTCTTGCAATCCGCAGTTACGAGACAGTGCCCTTGTGA
Protein sequence:
MQVDVPLEDNENNETECYVVDNPTLDLETYAASYTGFAKLYRLMFVADHCPSLRLEALKM
AISYVMTTYNVSLYQTLHKKLAEAVATVGLPDVAVQMGSQDIPVLDSMWVESKTKKAAIK
LEKLDTDLKNYKTNSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHIIMM
CLNVVKVSVYLQNWAHVLNYVSKAEGTPDFNEVPGKDSNQSILTRLKCAAGLAELATKKY
KSAAKHFLAASIDHCDYPELLSSNNVAVYGGLCALATFDRSELQKQVIVSSSFKLFLELE
PQLRDIIFKFYESKYASCLRLLDEIRDNLLLDMYLAPHLNSLYMQIRNRALIQYFSPYLS
ADMHLMAAAFNRTVNALEDELMQLILDGQIQARIDSHNKILYAKDVDQRSTTFERSLAMG
KEYQRRTSMLILRAALLKNHIHVKIVGREPGPQSGEAPGSSTSLAIRSYETVPL