| New model in OGS2.0 | DPOGS214470 |
|---|---|
| Genomic Position | scaffold4488:+ 4014-6255 |
| See gene structure | |
| CDS Length | 732 |
| Paired RNAseq reads | 20 |
| Single RNAseq reads | 173 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013356 (3e-47) |
| Best Drosophila hit | shaker cognate l, isoform B (4e-40) |
| Best Human hit | potassium voltage-gated channel subfamily D member 3 isoform 2 (3e-10) |
| Best NR hit (blastp) | PREDICTED: similar to Shaker cognate l CG9262-PB [Tribolium castaneum] (1e-75) |
| Best NR hit (blastx) | PREDICTED: similar to Shaker cognate l CG9262-PB [Tribolium castaneum] (6e-40) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0006813 potassium ion transport GO:0005249 voltage-gated potassium channel activity GO:0016021 integral to membrane GO:0008076 voltage-gated potassium channel complex GO:0055085 transmembrane transport GO:0005515 protein binding GO:0005250 A-type (transient outward) potassium channel activity |
| InterPro families | ND |
| Orthology group | MCL20474 |
Nucleotide sequence:
ATGGTGCCCGGTACCATCGCTGGTAAAATAGTTGGTGGTGTGTGCTCCTTGTCTGGTGTG
CTCGTGATCGCTCTGCCCGTACCAGTCATCGTCTCCAACTTCTCCAGGATCTACCACCAG
AACCAGCGAGCTGATAAAAGGAAGGCTCAGAGGAAAGCTCGTCTCGCTCGCATCCGCATC
GCTAAGGCTTCTTCAGGGGCTGCATTCGTTTCCAAGAAGAAGGCAGCAGAGGCTCGACTG
GCTGCTCAGGAGTCCGGGGTGGAGCTGGACGATGCTGGCAGAGATGAAGACATCTTTGAA
TTGCAACATCACCATCTGTTGCGATGCTTGGAGCGTACTACGGACAGGGAGTTTGTTGAG
ATGGAGAATCCCTACAATGGTGCTGCCAAGCGGCCCGGCTCGCCGTCCCCACTAGCCTCG
CCCGCACACTCGGGTCGTGCCCCGGCGTTGCTCGCTTGCTGTGCGCGATGTGGTTGTTGC
CCGCAGAAGTATCAGACTCAAGTAGGAAGCGTACACGCGGCACTCGGCGGTACACTGCGA
CCTCCAGACCTTCGGATACCTCGGTCTCAGCAGCCCCTAGCGAAGAACCTTTACCAGTAT
GTCCTTATGTTACCAACCAGTGATGGCTTCGCAGGTTGTCACTGTCTGGTGAAGTGGATG
GAGGCTTTCAATGTCTGCAGGGTGTTGGCTGGTTGTCGCTTTGTGGTTATATATAATATA
TGTTATGTTTAA
Protein sequence:
MVPGTIAGKIVGGVCSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRKAQRKARLARIRI
AKASSGAAFVSKKKAAEARLAAQESGVELDDAGRDEDIFELQHHHLLRCLERTTDREFVE
MENPYNGAAKRPGSPSPLASPAHSGRAPALLACCARCGCCPQKYQTQVGSVHAALGGTLR
PPDLRIPRSQQPLAKNLYQYVLMLPTSDGFAGCHCLVKWMEAFNVCRVLAGCRFVVIYNI
CYV