| New model in OGS2.0 | DPOGS210472 |
|---|---|
| Genomic Position | scaffold2348:- 41904-45279 |
| See gene structure | |
| CDS Length | 1845 |
| Paired RNAseq reads | 22 |
| Single RNAseq reads | 59 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002764 (0.0) |
| Best Drosophila hit | ND |
| Best Human hit | Bardet-Biedl syndrome 2 protein (7e-115) |
| Best NR hit (blastp) | PREDICTED: similar to Bbs2 protein [Tribolium castaneum] (1e-139) |
| Best NR hit (blastx) | PREDICTED: similar to Bbs2 protein [Tribolium castaneum] (1e-133) |
| GeneOntology terms | GO:0045444 fat cell differentiation GO:0048854 brain morphogenesis GO:0060296 regulation of cilium beat frequency involved in ciliary motility GO:0032402 melanosome transport GO:0005515 protein binding GO:0040015 negative regulation of multicellular organism growth GO:0033365 protein localization in organelle GO:0021756 striatum development GO:0045494 photoreceptor cell maintenance GO:0060271 cilium morphogenesis GO:0008104 protein localization GO:0021987 cerebral cortex development GO:0060170 cilium membrane GO:0050896 response to stimulus GO:0005932 microtubule basal body GO:0007288 sperm axoneme assembly GO:0034464 BBSome GO:0031514 motile secondary cilium GO:0021766 hippocampus development GO:0005886 plasma membrane GO:0030534 adult behavior GO:0005737 cytoplasm |
| InterPro families | IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain |
| Orthology group | MCL16669 |
Nucleotide sequence:
ATGCAAGTTTCTAGTGTCCAGCCAGTATTTAAATTAGAATTAAACCACAAAGTAACACCT
GGTATAGTAACTATCGCTAAATATGATGGTACACATTATTGTCTTACTGCGTCTGCTGGA
TATGATAAAATAATTATTCATCACCCTCACGGTGGTATGAGTGTTGGACGTGCTCAACGT
TCCCAGGCACATGGAGAAGTGTCTGAACTCAACCTTAGCCAAGCTGTGATAGCTTTAGAA
GCTGGGCCTATAAAACCAGACTGTGCGCGAGATATGCTTTTGATTGGCTCGCCCACCCAA
ATTTTAGCCTACGATGTCCATAACAATTCAGACATATTTTATAAAGAAGCTCCAGATGGT
ATAAATGTAATAATTGCAGCCCATTTTAGTAAATACTCAGATATGTTGGTCATGGTTGGC
GGAAATAGTTCTGTTTGTGGTATAAATTCGGAAGGCGAAGAGGTGTTTTGGAATGTTGTT
AGTGGAAAAGTTTTTTCCATGATAACATTTGATTTTGATAAGGATGGCAAAAATGAGCTG
CTTATAGGTTGCGAAGATTCTTATATAAAAGTACTAAAGGATGATCATTTTATCATGGAG
ATTGCGGAAACGGGGCCTGTTTCTTGTTTATCCTATATAAATGAAGTGAGATTTGCTTAC
GGACTAGCAAATGGAACTATTGGTATATATGAGGATGGCATCCGTCTTTGGAGAGTAAAG
TCGAAACAAAACGCAAGAAATCTTCAATGGTCAGGAGACAACTTAGTCTGTTGTTGGGCG
AATGGCCGAATAGACTGGAGAGATTGCACAGGGAGAGTACTAAGAAGAGTACAGTTACGA
TCTGACGCAGCGGCAATGATTTTAGCGGATTATCGCACAGTTGGCATCCCTGACCTTGTT
TGTGTATCAACTAAAGGCGAAGTGCTTGGATTCCCGCCGATCCAAGAAAATGGTGGACCA
AACACAAAAAAAATTGCTCCATCGGAAGAGGATAGGCTTGCAGTAACTGAGTTGCTGAAT
AAGAAGCAGGCGTTAATGATAGAACTGCAACACTACGAGGGCAACGCTGCTAACACATCC
TTAGACATAGACCGACCTGACAGCGCTATGCCGACAAATACAAGGCTTCAAGTCGCAGTA
GCCGCTGACACAGAAGAAGGATGCCTGCAGTTGGCTGTATCGACAAACAATGACACAATT
GTGCGTATGGCACTAGTGTTAGCGGAAGGTATTTTTGATTCTGGAGAAACGCTCGCGCGT
CATCCTCATCCGGCTAAACTGAGATCCGTTCTTTACATACCACTAAAGCCACCGAGAGAT
GTTCCCGTTGATGTTCATATTAAGGCACTGGTTGGTTATCCAGAGAGTGAACGGTTTCAC
ATATTTGAACTTACAAAGCAGTTGCCACGTTTTTCGATGTATACTTTAGTTTCGTCATCT
ATCGCAAAGTCAAAGGTTGTAAACTACGTGACTTTCCGCATTACTGAGAGAGTTCAGAGA
ATATGCATATGGATAAATCAAAACTTTTTATTAGACGAAGAAATTGAAATTAACAACGAG
GAGACAAAAGAGCTGCATATTAGTTTTATGTGTCTCAGAGATATGTCTCGCTTGGATTTG
GATTTTTGCCCAGATGGTCAAGTGAAAATTACAACTCACGACATTAGACTTGCTGGAGAT
TTGATTCAGAGTTTGGCTGTTTTTTTGAACTTGTCTGATTTACAGGTATTTCGAATACCT
ATTTTATTTTTTGTTATTAATTTTTTTTTTATAATTTTTTATTACATGTGTGACCAATAC
AAAATCGAACGAAATATATTTGTCTTTATAAGGTTCTGTTGGTAG
Protein sequence:
MQVSSVQPVFKLELNHKVTPGIVTIAKYDGTHYCLTASAGYDKIIIHHPHGGMSVGRAQR
SQAHGEVSELNLSQAVIALEAGPIKPDCARDMLLIGSPTQILAYDVHNNSDIFYKEAPDG
INVIIAAHFSKYSDMLVMVGGNSSVCGINSEGEEVFWNVVSGKVFSMITFDFDKDGKNEL
LIGCEDSYIKVLKDDHFIMEIAETGPVSCLSYINEVRFAYGLANGTIGIYEDGIRLWRVK
SKQNARNLQWSGDNLVCCWANGRIDWRDCTGRVLRRVQLRSDAAAMILADYRTVGIPDLV
CVSTKGEVLGFPPIQENGGPNTKKIAPSEEDRLAVTELLNKKQALMIELQHYEGNAANTS
LDIDRPDSAMPTNTRLQVAVAADTEEGCLQLAVSTNNDTIVRMALVLAEGIFDSGETLAR
HPHPAKLRSVLYIPLKPPRDVPVDVHIKALVGYPESERFHIFELTKQLPRFSMYTLVSSS
IAKSKVVNYVTFRITERVQRICIWINQNFLLDEEIEINNEETKELHISFMCLRDMSRLDL
DFCPDGQVKITTHDIRLAGDLIQSLAVFLNLSDLQVFRIPILFFVINFFFIIFYYMCDQY
KIERNIFVFIRFCW