| New model in OGS2.0 | DPOGS210425 |
|---|---|
| Genomic Position | scaffold2348:+ 34597-39073 |
| See gene structure | |
| CDS Length | 2373 |
| Paired RNAseq reads | 698 |
| Single RNAseq reads | 1799 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002754 (7e-35) |
| Best Drosophila hit | origin recognition complex subunit 1 (2e-95) |
| Best Human hit | origin recognition complex subunit 1 isoform 2 (2e-70) |
| Best NR hit (blastp) | origin recognition complex subunit 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | origin recognition complex subunit 1 [Bombyx mori] (4e-172) |
| GeneOntology terms | GO:0006261 DNA-dependent DNA replication GO:0005664 nuclear origin of replication recognition complex GO:0006270 DNA-dependent DNA replication initiation GO:0005634 nucleus GO:0006342 chromatin silencing GO:0003677 DNA binding GO:0005524 ATP binding GO:0017111 nucleoside-triphosphatase activity GO:0008283 cell proliferation GO:0006277 DNA amplification |
| InterPro families | IPR003959 ATPase, AAA-type, core IPR001025 Bromo adjacent homology (BAH) domain IPR003593 ATPase, AAA+ type, core IPR020793 Origin recognition complex, subunit 1 |
| Orthology group | MCL12740 |
Nucleotide sequence:
ATGCCAAGACGGAGAAATGTAGTTAAAAACGTACAGTGGCTAAGTGAAGAAATACAAAAT
GATCAAAACCTTTCAACTTCTTTTCACTTCTACCAAAAATTTCAGTTTAAAGAGTTAGTG
GCAGAAGTTGGTGATCACATTCTGGTGTCCAATGCTGATGCAGCGGAGCCAGATACTGAA
GAAGGTTGTGATGCGGCGAGGATTATGTCTCTTTACGAAGATCGGTCTAATAAAAATGAC
CCATTCAGAGCGAAAGTCCAATGGTATTCTAGACCCTTAGATTTACCAAAAGGATGCCTT
AATAACTCGGAACACATTGCATTCTATGAAAAAGAGGTAGTACAAGATCACAGACCATTT
GACACTGATGTATCAATAGAAACGTTTTTTAAAAAATGTACAGTAATACATACATTCACA
AAAGACACCGATGAAATTATAAAGAAGTCGACATCACATTACATTTGTCGATATCGTCTT
ATAGCTGTCGGAAGGAAAAAAGTTACGCTGGAACCAGTACTAGAAGAAGAAAGGAAAGCA
TTGCAACTGTTAAGTACCCCCACAAAGAATTATGCAACTCCCCAAAGCAAAACACCTAAA
ACACCTAGCAGTTTAATAAAAAGAATGGGCAGGGTTTCAATATCAGATAAAAATTGGAGT
GTCAGTAAAAATGATGGTACAAAACTACTCCTTAAACGGGCTATACTTTCAGACAAAAAC
GAAAAGGCCTCACCCAAAACGGCTACACCAAAAAATGACACCTTCACTCCAGTTACAGAA
ACACCAAAGAGTGCTAAGAAATTGAGCAAAAAAAATCTTGAAGAGATTCTGTCTATGGAA
TTAAAAGAAAATTCTGATGAGGAGCTTCCTACTCTGATCATAAGGCAGCATGTGCCATCG
ACGCCTAAACGGAAAACGCAAATAAAAACAACCGATGAAACTCCAAAGAAGGTTTTAGTG
TTCGAGGATGATGGAAAAGACACATGCACTACCTATTCCACAAGATCCGGAAGGGTCACA
AGGAATCCTGTATACCACGAAGAAATTTCGCCAGTTAAAAGAACACCTAGACGAACAGTC
CATAGACATTCAAGTTGCAGTGATGACGACTACAAAATTAAAACCCCCAAAGTTCCTAAA
ACACCAAAGACCCCTAAGACACCAAAAACACCGAGGGCGAGAAGCTCTATAACAAAAACG
CCAAAAAGTATATCAAGAAGAATTCTCACCAGCGAACTTACACCTACCCTACACAGCAGG
GTACACTCCATTGACAACAGCAATGATTACACAAAAGAAAACAAATCACTTCCCGGCAGA
GAGAATCAATTGCATGAGATATTGTCATTTGTTAAGAGCAAGCTGTTACATGGAATTAGT
GGATGCATGTACATATCAGGGGTGCCGGGTACAGGAAAGACGGCAACGGTGAATTCAGCG
CTTCAGATATTGAAGGAGGAACCTGATCTACCCGAATTCCAACTAGTCGAGGTCAACGGC
ATGAGAATCGCTGAACCCAGACAGGCTTACATACAAATATACAAACAGCTCACTGGCAAG
TCAGTGGTATGGGAACAGGCCTGTTCTTTATTGGAGAAGCGATTCACAAACCCTGGACCT
CGACGGACACCGACTGTGCTCCTTGTTGATGAGCTGGACGCACTATGCAATAGGCGTCAG
GATGTACTTTACAGCATCATGGAGTGGGCTGCCCATAACACAGCGCTTCTCACCGTGTTG
GCTGTGGCTAACACTATGGACCTTCCAGAACGAGCGCTAGCCTCAAGAGTGGCGTCCAGA
CTGGGACTGACCAGATTAACGTTCCCGCCATACACGCATACACAGTTACAATGTATAGTA
GCCACCAGACTGGCCGGAGCTAACGTCACGCCCGACGCGGTACAACTCATAGCCAGGAAG
GTAGCGGCTGTGTCGGGCGACGCTCGGCGCGCGCTCGCCCTGTGCAGTCGAGCGTTGGAG
CTGAGTGGAGCGGGGGGCGCGGGCCTAGCGGAGGTACAACGAGCGTTGAACGAGGCCGCC
TCCAGCGCCCCGGTCCGCGCCATTAGGAACTGCTCCCCGGCTGAGAGACTCATACTAAGA
GCTGTAGCCGCTGAGGTGGAAAGAACGGGCTCAGACGAGACAACTCTATCCCGTGTATTA
CAAACGGCCGGTGCGATCGTCGCCTTAGACGGCCGTCCGTACAGGTCGGCGCCTAATATT
CGCCCACCCACACCGTCTCAGACCCTAGCCATATGTGCTAGACTGGCAGCTATCAAACTT
CTTCTTATGGAACCAAAGCCTGCTGAGCCCAGAATACTCCTGAACGTCAGCGCTGATGAC
GTCCATTATGCTACTAAACAGATTACTGTGTGA
Protein sequence:
MPRRRNVVKNVQWLSEEIQNDQNLSTSFHFYQKFQFKELVAEVGDHILVSNADAAEPDTE
EGCDAARIMSLYEDRSNKNDPFRAKVQWYSRPLDLPKGCLNNSEHIAFYEKEVVQDHRPF
DTDVSIETFFKKCTVIHTFTKDTDEIIKKSTSHYICRYRLIAVGRKKVTLEPVLEEERKA
LQLLSTPTKNYATPQSKTPKTPSSLIKRMGRVSISDKNWSVSKNDGTKLLLKRAILSDKN
EKASPKTATPKNDTFTPVTETPKSAKKLSKKNLEEILSMELKENSDEELPTLIIRQHVPS
TPKRKTQIKTTDETPKKVLVFEDDGKDTCTTYSTRSGRVTRNPVYHEEISPVKRTPRRTV
HRHSSCSDDDYKIKTPKVPKTPKTPKTPKTPRARSSITKTPKSISRRILTSELTPTLHSR
VHSIDNSNDYTKENKSLPGRENQLHEILSFVKSKLLHGISGCMYISGVPGTGKTATVNSA
LQILKEEPDLPEFQLVEVNGMRIAEPRQAYIQIYKQLTGKSVVWEQACSLLEKRFTNPGP
RRTPTVLLVDELDALCNRRQDVLYSIMEWAAHNTALLTVLAVANTMDLPERALASRVASR
LGLTRLTFPPYTHTQLQCIVATRLAGANVTPDAVQLIARKVAAVSGDARRALALCSRALE
LSGAGGAGLAEVQRALNEAASSAPVRAIRNCSPAERLILRAVAAEVERTGSDETTLSRVL
QTAGAIVALDGRPYRSAPNIRPPTPSQTLAICARLAAIKLLLMEPKPAEPRILLNVSADD
VHYATKQITV