| New model in OGS2.0 | DPOGS204755 |
|---|---|
| Genomic Position | scaffold157:- 105475-107120 |
| See gene structure | |
| CDS Length | 1038 |
| Paired RNAseq reads | 504 |
| Single RNAseq reads | 1391 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002855 (9e-58) |
| Best Drosophila hit | rhomboid-6, isoform B (1e-11) |
| Best Human hit | rhomboid-related protein 1 (3e-08) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL004502 [Aedes aegypti] (4e-23) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (2e-15) |
| GeneOntology terms | GO:0016021 integral to membrane GO:0004252 serine-type endopeptidase activity |
| InterPro families | IPR022764 Peptidase S54, rhomboid domain IPR002610 Peptidase S54, rhomboid |
| Orthology group | MCL39702 |
Nucleotide sequence:
ATGACTCCCGACCTGGAGGAGTGTCCAGAGACGGAGAGACTGAACGGGGACTACCAGGAG
GAGACATCCCATCAGGGCCGCAGAGTTCTACCGGACGAGCCGCCCGCTGTGCAGGCCTGG
GTCGAGAACGAGGAGCCGGGGCTGGCCTGCGATAGTAGGACCAACAGTCCCGGAGAGAAC
AGGAGACTCCTGGGAAATAAGCCTCATCACAAATCAACCGCTAAACTCCAAGCTGGTCTC
ACGTTAGGAGTCTGGGGAGCTCCAAAAAAGCACGCGAAATACCCACGAAGTTTGAAAAAT
GTAAAGACAAAACATAACACGAAGTCGAAGTTCCAAAAACGAAAGGAAAAATTAATAGAA
GCATTAAAGCCGCCCTACTTCATCATCACCATGCTGAGTATTATTGTGATGGTACATTTC
TGTGGACCAGACAAGTGGCGTGCGACGCTCGAGTGGTCGCCGGGTGGCTGGTGGCGGGAA
CCCTGGAGACTTCTCACGTACGGCTTCGTCCACGCCGGCCCCGCGCATTTAGCACTTAAC
GCAATAGTTGCCCTAACGGTGGGGTGGCGTCTGGAGCGCGAGCAAGGTTGGTCTCGTGTG
GCGCTGGTGTGGGCGGGCGGTGTGGCAGCGGGCGCCTTGGGAGCTGGTGCCTTACAACCT
CACGTCAGGGTGGTGGGTTCTTCGGCCGCCGTCTACGCTCTTCTCACCGCGCACATACCC
AATGTCTGTCTGAGGTTCGGTCATATCCCTCTGTGGTGGTTCCGTCCCCTGAGTGTGGTC
GTATTGGGCGCCTCGGAGCTGTGCTGGGCGCTGCTGCAGGCTCCGGATCAGAAAGAAAGC
AACCATGTAGCGTGGGGAGCACACGCGCTCGGGGCTGCGGTCGGCGTGCCGCTAGCGTTC
ATCGCCTTCACAGGTGAAAATTCGTCACAGACCAAAATCACAGTTTGTCGCGTAGCTTCC
TGTATGTTGTTGGCGGCCGGGGTCCTCGCTGCTATTATGCATTACATGTTTTGGGCGGAC
TTTGATCACTTCACCTGA
Protein sequence:
MTPDLEECPETERLNGDYQEETSHQGRRVLPDEPPAVQAWVENEEPGLACDSRTNSPGEN
RRLLGNKPHHKSTAKLQAGLTLGVWGAPKKHAKYPRSLKNVKTKHNTKSKFQKRKEKLIE
ALKPPYFIITMLSIIVMVHFCGPDKWRATLEWSPGGWWREPWRLLTYGFVHAGPAHLALN
AIVALTVGWRLEREQGWSRVALVWAGGVAAGALGAGALQPHVRVVGSSAAVYALLTAHIP
NVCLRFGHIPLWWFRPLSVVVLGASELCWALLQAPDQKESNHVAWGAHALGAAVGVPLAF
IAFTGENSSQTKITVCRVASCMLLAAGVLAAIMHYMFWADFDHFT