| Genomic Position | scaffold89:- 264532-265833 |
|---|---|
| See gene structure | |
| CDS Length | 1302 |
| Paired RNAseq reads | 527 |
| Single RNAseq reads | 1433 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000196 (3e-07) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (6e-149) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-145) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGAAGAATCGGAAAGCGGTGGGACCTGACGATATTCCGATCGAAGCGTGGAAATCATTG
GGCTCTCTTGGTGTGCTCATACTGACGGACCTTTTTAACCGCGTCTTGAACACTGGGACT
ATGCCACATCAGTGGCGTTATAGTTACATTACCCCTATATACAAAGGCAGGGGCAGTGTT
CAAGATTGTGGTAGTTATAGGGGCGTTAAGATCATGAGTCACACCATGAAGCTCTTTGAG
CGTATGATCGACCTCAGGCTCCGCCGAGAGTGTACTGTCTCGGAATGTCAATATGGATTT
CAGCCAGGATCGGGCACCTTGGACGCCATCTTTGCCATCAGAACTCTGATGGAGGCATAC
AGGGAAAAAAGGAGAGCTCTGCATGTCGCATTCCTAGATCTGCAGAAGGCCTTTGACTGC
GTGCCTCGTCAATGTATCTGGTGGGCATTGCGATTCAAAGGGATCCCTGAGGCCTATATT
GACATCATCAGAGACATGTACCGCGATTCCGTTTCAATGGTTAGGACTGCTGTTGGCGAT
ACAAAACCCTTTCCGATCTCAGTAGGGCTTCACCAAGGCTCGGCTCTTAGCCCCTTCTTG
TTCAATGTAGTGCTGGACACTGTCTCGGCTAACATCCAGGACCAGCCTCCATGGCTGATG
ATGTATGCCGATGACATAGCGCTCATTGATGAGAGCAGGTTGACGCTAGAGCGAAGAGTG
AACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTTAAACTAAATGTGACGAAGACCGAG
TACATGGCTTGCGGAAGCCCGGACTCTTGCACTATCCATATAGGTCCTGAACCAGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGATGCTAAAGACCGTGCTAAAGACCGTGCAAAAGACCGT
GCAAAGTGGAAGAGTTTGAGCAGGAAGGCAGACCCTGGCTAA
Protein sequence:
MKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGRGSV
QDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLMEAY
REKRRALHVAFLDLQKAFDCVPRQCIWWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGD
TKPFPISVGLHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRV
NLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAKDRAKDRAKDR
AKWKSLSRKADPG