| New model in OGS2.0 | DPOGS206057 |
|---|---|
| Genomic Position | scaffold89:- 83444-83890 |
| See gene structure | |
| CDS Length | 447 |
| Paired RNAseq reads | 1288 |
| Single RNAseq reads | 3581 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006840 (1e-61) |
| Best Drosophila hit | eukaryotic initiation factor 1A, isoform B (6e-59) |
| Best Human hit | eukaryotic translation initiation factor 1A, X-chromosomal (9e-43) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 1A [Bombyx mori] (6e-78) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 1A [Bombyx mori] (1e-62) |
| GeneOntology terms | GO:0003743 translation initiation factor activity GO:0005829 cytosol GO:0006412 translation GO:0006413 translational initiation GO:0016282 eukaryotic 43S preinitiation complex GO:0003723 RNA binding GO:0007224 smoothened signaling pathway GO:0006911 phagocytosis, engulfment GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization |
| InterPro families | IPR018104 Translation initiation factor 1A (eIF-1A), conserved site IPR001253 Translation initiation factor 1A (eIF-1A) IPR006196 RNA-binding domain, S1, IF1 type IPR016027 Nucleic acid-binding, OB-fold-like IPR012340 Nucleic acid-binding, OB-fold |
| Orthology group | MCL13514 |
Nucleotide sequence:
ATGCCGAAGAATAAAGGAAAAGGAGGTAAAAACAGAAGGAGGGGGAAGAACGAAAATGAA
ACAGAAAAACGTGAGTTAGTTTTTAAGGAAGACGGCCAGGAGTACGCCCAAGTCACAAAG
ATGCTCGGTAATGGCCGCTTAGAGGCCATGTGCTTTGATGGCATAAAACGTCTTTGCCAC
ATCAGAGGTAAATTACGAAAAAAAGTATGGATAAATCAAGGAGACATCATACTTATTGGC
TTACGAGATTATCAAGACGCCAAAGCTGACGTAATTTTGAAATACACCCCTGACGAGGCA
AGAAATCTTAAAACGTACGGAGAATTTCCTGAAACAGTTCGCATCAATGAGACTGTTGTA
TATTCTGTTGATGGTCTCGATGAAGACATCGAATTCGGAGACGAAGTCAGCTCGGAAGAT
GAGGCTGATGCTGTTGATGCTATATAA
Protein sequence:
MPKNKGKGGKNRRRGKNENETEKRELVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCH
IRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARNLKTYGEFPETVRINETVV
YSVDGLDEDIEFGDEVSSEDEADAVDAI