| New model in OGS2.0 | DPOGS206119 |
|---|---|
| Genomic Position | scaffold89:+ 150261-159319 |
| See gene structure | |
| CDS Length | 648 |
| Paired RNAseq reads | 18 |
| Single RNAseq reads | 403 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003895 (4e-27) |
| Best Drosophila hit | Ecdysone-induced protein 75B, isoform C (3e-47) |
| Best Human hit | nuclear receptor subfamily 1 group D member 2 isoform 2 (2e-31) |
| Best NR hit (blastp) | RecName: Full=Ecdysone-inducible protein E75; AltName: Full=Nuclear receptor subfamily 1 group D member 3 (8e-58) |
| Best NR hit (blastx) | transcription factor E75A [Plodia interpunctella] (6e-57) |
| GeneOntology terms | GO:0005634 nucleus GO:0004879 ligand-dependent nuclear receptor activity GO:0003704 specific RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0007591 molting cycle, chitin-based cuticle GO:0048477 oogenesis GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death GO:0018990 ecdysis, chitin-based cuticle GO:0007553 regulation of ecdysteroid metabolic process GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0019730 antimicrobial humoral response GO:0020037 heme binding |
| InterPro families | IPR001628 Zinc finger, nuclear hormone receptor-type IPR013088 Zinc finger, NHR/GATA-type IPR008946 Nuclear hormone receptor, ligand-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGTCGCCGGACAGCAGTTACGGACGATATGATGTGTCGACTCCGTCAGATACTATGATG
GCTTCGACGCACAAGGAACGGGAACCCGAACTACATATAGAGTTCGATGGTACAACCGTT
TTATGCCGCGTCTGCGGTGACAAGGCCAGTGGTTTCCACTACGGCGTCCATTCCTGCGAG
GGGTGCAAGGGCTTCTTCCGACGGTCCATACAACAGAAGATCCAGTACAGGCCCTGCACC
AAGAACCAGCAGTGCAGCATCTTGAGAATAAACAGAAATCGTTGTCAATACTGCAGATTG
AAAAAATGCATCGCCGTGGGGATGAGCAGAGATGGGGCCTGCGCGGAGTTTATTGACGGC
GGTCGTCGTACACGGCTGCGCGGGGGAGGAGGGGGCGGGCGCCATCGCCCTCCGCTCTCC
CCCTCCAGCGACTCCTCAAGTTCAAGGTTGAAGCGGCGCGCGCAGCTCAGTGCGAGGGAG
TCCGGCCCGCGCATCGGTCGTCAGCCCTCTTGCTATCGCTATGTCAGTGCGTCGCTTCGC
AGTCAGCCACGAGAACTCGAGCCCAGCTCACATCGCAGTGAATCGCTGACAACGCGTCAA
TCGGATTACTATCGCACATTCGGATTACAGTGCCTGTGCCTGTGCTAA
Protein sequence:
MSPDSSYGRYDVSTPSDTMMASTHKEREPELHIEFDGTTVLCRVCGDKASGFHYGVHSCE
GCKGFFRRSIQQKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDGACAEFIDG
GRRTRLRGGGGGGRHRPPLSPSSDSSSSRLKRRAQLSARESGPRIGRQPSCYRYVSASLR
SQPRELEPSSHRSESLTTRQSDYYRTFGLQCLCLC