| New model in OGS2.0 | DPOGS206120 |
|---|---|
| Genomic Position | scaffold89:+ 159450-162411 |
| See gene structure | |
| CDS Length | 1839 |
| Paired RNAseq reads | 1266 |
| Single RNAseq reads | 3286 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006839 (0.0) |
| Best Drosophila hit | Ecdysone-induced protein 75B, isoform D (3e-134) |
| Best Human hit | nuclear receptor subfamily 1 group D member 2 isoform 1 (2e-31) |
| Best NR hit (blastp) | nuclear hormone receptor E75 isoform B [Bombyx mori] (0.0) |
| Best NR hit (blastx) | transcription factor E75B [Plodia interpunctella] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0004879 ligand-dependent nuclear receptor activity GO:0003704 specific RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0007591 molting cycle, chitin-based cuticle GO:0048477 oogenesis GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death GO:0018990 ecdysis, chitin-based cuticle GO:0007553 regulation of ecdysteroid metabolic process GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0019730 antimicrobial humoral response GO:0020037 heme binding |
| InterPro families | IPR000536 Nuclear hormone receptor, ligand-binding, core IPR008946 Nuclear hormone receptor, ligand-binding IPR001723 Steroid hormone receptor IPR001728 Thyroid hormone receptor |
| Orthology group | MCL12944 |
Nucleotide sequence:
ATGGGTGAAGATTTACCGATACTTAAAGGGATTTTAAATGGAGTCGTGAAATATCACAAT
GCTCCCGTCCGATTCGGTCGTGTTCCAAAGCGCGAGAAGGCTCGCATTTTGGCCGCCATG
CAACAATCTTCGTCGTCTCGTGCCCAGGAGCAGGCGGCGGCCGCTGAGCTAGACGACGCG
CCCCGGCTCCTGGCCCGCGTGGTCCGCGCACACCTGGACACCTGCGAGTTCACACGCGAT
CGCGTCGCCTCCATGAGGGCGCGGGCTCGCGACTGTCCCACCTACTCACAACCGACTTTG
GCTTGTCCGCTGAATCCAGCTCCAGAGCTACAGTCCGAGAAGGAATTCTCTCAGCGTTTC
GCGCACGTTATCAGAGGCGTCATTGATTTCGCCGGCCTCATTCCTGGATTCCAATTACTT
ACGCAAGATGACAAGTTCACTCTCTTAAAAAGCGGTCTCTTCGACGCCCTGTTCGTGAGA
CTCATCTGCATGTTCGATGCGCCACTCAATAGCATAATATGCCTCAATGGACAACTCATG
AAACGGGATTCCATTCAGAGTGGAGCGAACGCACGCTTCCTTGTTGACTCTACTTTTAAG
TTCGCCGAGCGCATGAATTCTATGAATTTAACGGACGCCGAGATCGGTCTCTTCTGCGCC
ATAGTTCTCATAACTCCCGACCGGCCGGGTCTTCGTAATATTGAATTAGTTGAGCGAATG
CACGCGAGACTGAAGGCGTGCCTGCAGACCGTCGTCACACAGAACAGACCTGACAGACCT
GGCTTCCTCCGGGAGTTAATGGACACTCTACCTGATCTCCGTACACTGAGTACTCTTCAT
ACTGAAAAGCTCGTAGTTTTCCGAACCGAGCACAAGGAATTACTGAGGCAACAGATGTGG
GGAGACGAAGAGGGATGCTCGTGGGCCGACTCCGGAGCAGACGAGTCAGCTCGCAGCCCC
ATCGGCTCGGTATCCAGCAGTGAATCCGGTGAAGCGATGGGTGACTGTGGAACTCCTCTG
CTGGCCGCGACTCTGGCCGGCAGACGGCGCCTGGACTCCCGCGGGTCCGTGGACGAGGAA
GCTCTTGGTGTCGCTCACCTCGCTCACAACGGCCTCACCGTCACCCCTGTGCGCCCTCCG
CCACGCTACCGCAAACTAGATTCCCCCACAGACTCCGGCATAGAGTCTGGGAACGAGAAG
CACGAGAGAATAGTGGGGCCCGGCTCGGGCTGCTCCAGCCCTCGCTCGTCATTGGAGGAA
CACACGGAGGAGAGGCGACCCGTGCCGGCGGACGACATGCCCGTGCTGAAACGAGTGCTA
GAGGCGCCGCCGCTGTACGACACTCCCTCATTAATGGACGAGGCCTACAAACCTCACAAG
AAGTTCCGCGCGATGCGTCGCGACACGGGCGAGGCGGAGGCCCGGCCGATGCTGCTGACC
CCGTCCCCGCAGCCGCCGCAGCACCCTCACCCCGCCAGCCCCGCTCATCCAGCCCACTCT
CCGCGCCCCCTGCGTGCGTCGCTGTCGTCGACGCACTCCGTGCTAGCTAAGAGTTTAATG
GAAGGTCCGCGTATGACTCCGGAGCAACTCAAGCGCACGGACATCATCCAGCAGTACATG
CGGCGCGGGGACGTGACTGCCAGCAGTTCCAGCACGTCGAGCGCCGGCGAGTGTCCCCTC
CGCAGCGGTCTGCTGGCTTGTTACCGCGGCGCGTCTCCGTCTCCGGCGCCAGAGCCGGTG
CTGGAGCTGCAGGTGGAGGTGGCGGACGCTCCCCTGAACCTGTCCAAGAAGTCTCCCTCG
CCGCCGCGCTCCTTCATGCCCCGCATGCTGGAGGCGTGA
Protein sequence:
MGEDLPILKGILNGVVKYHNAPVRFGRVPKREKARILAAMQQSSSSRAQEQAAAAELDDA
PRLLARVVRAHLDTCEFTRDRVASMRARARDCPTYSQPTLACPLNPAPELQSEKEFSQRF
AHVIRGVIDFAGLIPGFQLLTQDDKFTLLKSGLFDALFVRLICMFDAPLNSIICLNGQLM
KRDSIQSGANARFLVDSTFKFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNIELVERM
HARLKACLQTVVTQNRPDRPGFLRELMDTLPDLRTLSTLHTEKLVVFRTEHKELLRQQMW
GDEEGCSWADSGADESARSPIGSVSSSESGEAMGDCGTPLLAATLAGRRRLDSRGSVDEE
ALGVAHLAHNGLTVTPVRPPPRYRKLDSPTDSGIESGNEKHERIVGPGSGCSSPRSSLEE
HTEERRPVPADDMPVLKRVLEAPPLYDTPSLMDEAYKPHKKFRAMRRDTGEAEARPMLLT
PSPQPPQHPHPASPAHPAHSPRPLRASLSSTHSVLAKSLMEGPRMTPEQLKRTDIIQQYM
RRGDVTASSSSTSSAGECPLRSGLLACYRGASPSPAPEPVLELQVEVADAPLNLSKKSPS
PPRSFMPRMLEA