| New model in OGS2.0 | DPOGS205589 |
|---|---|
| Genomic Position | scaffold1229:- 49667-62014 |
| See gene structure | |
| CDS Length | 2097 |
| Paired RNAseq reads | 384 |
| Single RNAseq reads | 1106 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009688 (0.0) |
| Best Drosophila hit | hormone receptor-like in 46, isoform A (5e-99) |
| Best Human hit | nuclear receptor ROR-alpha isoform d (4e-40) |
| Best NR hit (blastp) | hormone receptor 3C [Choristoneura fumiferana] (0.0) |
| Best NR hit (blastx) | hormone receptor 3C [Choristoneura fumiferana] (0.0) |
| GeneOntology terms | GO:0004879 ligand-dependent nuclear receptor activity GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0007552 metamorphosis GO:0040034 regulation of development, heterochronic GO:0005515 protein binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0043565 sequence-specific DNA binding GO:0016319 mushroom body development |
| InterPro families | IPR001628 Zinc finger, nuclear hormone receptor-type IPR000536 Nuclear hormone receptor, ligand-binding, core IPR008946 Nuclear hormone receptor, ligand-binding IPR013088 Zinc finger, NHR/GATA-type IPR001723 Steroid hormone receptor IPR001728 Thyroid hormone receptor |
| Orthology group | MCL10685 |
Nucleotide sequence:
ATGAACAACAATCAGTTCCACGAGCTGTTCGGGTCTCAGTGGCCTCCGGACCAACACGGG
GGTCACTCGTCGGCGACGACGATGCTGCACCAGGGCCAGCAGCAGCCCCAGATGCAACTG
AAGAGGGAGCCCCACGACGTGCCCGGGATGCACTCCATGGGCATGGACATCACGAGCGGC
TCCGTCGCCGACAGTACATCCCCGCCCCCTGGAAACAGTGAATCTATGTTCGGATCCTCC
ATCTCGGGAATGTTCATGGATAAAAAGGCCGCTAACTCTATCAGAGCCCAAATCGAGATC
ATACCCTGTAAAGTGTGTGGAGATAAGTCCTCAGGGGTCCACTATGGGGTGATCACTTGC
GAGGGCTGCAAGGGATTCTTCAGGAGATCACAGAGCACAGTGGTCAACTATCAGTGCCCG
AGGAACAAAGCCTGCGTAGTGGACCGCGTCAACAGGAACAGGTGCCAGTACTGCAGGCTC
CAGAAGTGTCTTAAGCTGGGAATGAGCCGCGATGCGGTGAAGTTCGGTCGCATGTCCAAG
AAGCAGCGGGAGAAGGTGGAGGACGAGGTGAGGTTCCACCAGGCGCAGATGAGGGCGCAG
TCTGACGCCGCCCCGGACTCGGTGTACGACGCGCAGCAACAGACGCCCAGCTCCAGCGAC
CAGTTCCACGGACACTATAACAGCTACCAGAACTACGGTTCCCCGCTGTCGTCATACGGA
TACAACGCGCCGCTCAACTCCAACCTGAACATTCAGGCCCAACCTCCCCAATACGACGTG
TCGGCCAACTACGTGGACTCCACCACGTACGAGCCCAAGCAACCCGGCTTCCTCGACACG
GACTTCATAGACCATGACGAACAACAAAAAACTATCCGAGCGTCCACATCCACGACAACA
GCGACGACAGCGACGACGACAATGAGACAGTCCATGAGCGACGTCAACAGACCCAGGGTG
CAGGAGTTCGACAGATACGATGAGAGGATCCAGAGCCCGCCGGCGAGCGTCATAGCTATC
AAGCAGGAAATCAAACCGGAGACCTCCATGGGCGTAGACAATCTAGTGGCCAGCTACGTC
GACTCCACCACGTTCCTTCATAGTCCGTCGAACCTGAACAGTCCCATGGACATACAGAAC
TCGGTGCTAGTGAGCGGCCAGAGCTCGGTGTCGTTGACGAGCGAGGAGCTCAGCCCCGAC
GATCTCACGAACAGCAACGCCAGGCTGATGGATCCTCTCAACATGAACATGTCGGGCATG
GGTATGGTGAACCCCAACGCCGTGTCCACGCGGCGGCAGCAGGGCAGCGCGGACGACCTG
CCGTCGGAAGGTGAAATAAGTAAGGTACTGGTTAAAAGTCTTGCGGAGGCTCACGCGAAC
ACGAACCCCAAGTTGGAGTACATACACGAGATGTTCAGGAAGCCGCCGGATGTCTCTAAG
TTGCTATTCTATAACTCGATGACGTACGAGGAGATGTGGCTGGACTGCGCCAACAAGCTC
ACATCCATGATCCAGAACATCATCGAGTTCGCCAAGCTCATCCCCGGCTTCATGAAGCTC
AGCCAGGACGACCAGATCCTGCTGCTAAAATCAGGTTCCTTCGAACTAGCGATCGTCCGT
CTGTCCCGTCTGATAGACATCAACAGAGATCACGTGCTGTACGGTGACGTGGTGCTGCCT
ATAAGGGAGTGTGTACACGCACGCGATCCGCGCGACATGTCGCTAGTGGCTGGCATCTTC
GACGCTGCTAAGACGATCGCACGACTCAAGCTCACGGAGACTGAACTGGCGCTGTACCAG
AGCTTGGTGCTGCTGTGGCCGGAGCGTCACGGTGTCCGCGGTAACCCTGAGATCCAGATG
TTGTTCAACATGTCCATGGCTACCATGAGACACGAGATAGAGACGAACCACGCGCCCCTC
AAGGGTGACGTCACAGTACTAGACACACTGCTCGCTAAGATACCCACCTTCAGAGAGCTG
TCGTTAATGCACCTCGAAGCGCTGTGTCGCTTTAAGGCAGCGCATCCACATCACGTATTC
CCAGCGCTTTATAAGGAACTGTTCTCACTGGACAGCGTCCTAGATTACACGCAGTAA
Protein sequence:
MNNNQFHELFGSQWPPDQHGGHSSATTMLHQGQQQPQMQLKREPHDVPGMHSMGMDITSG
SVADSTSPPPGNSESMFGSSISGMFMDKKAANSIRAQIEIIPCKVCGDKSSGVHYGVITC
EGCKGFFRRSQSTVVNYQCPRNKACVVDRVNRNRCQYCRLQKCLKLGMSRDAVKFGRMSK
KQREKVEDEVRFHQAQMRAQSDAAPDSVYDAQQQTPSSSDQFHGHYNSYQNYGSPLSSYG
YNAPLNSNLNIQAQPPQYDVSANYVDSTTYEPKQPGFLDTDFIDHDEQQKTIRASTSTTT
ATTATTTMRQSMSDVNRPRVQEFDRYDERIQSPPASVIAIKQEIKPETSMGVDNLVASYV
DSTTFLHSPSNLNSPMDIQNSVLVSGQSSVSLTSEELSPDDLTNSNARLMDPLNMNMSGM
GMVNPNAVSTRRQQGSADDLPSEGEISKVLVKSLAEAHANTNPKLEYIHEMFRKPPDVSK
LLFYNSMTYEEMWLDCANKLTSMIQNIIEFAKLIPGFMKLSQDDQILLLKSGSFELAIVR
LSRLIDINRDHVLYGDVVLPIRECVHARDPRDMSLVAGIFDAAKTIARLKLTETELALYQ
SLVLLWPERHGVRGNPEIQMLFNMSMATMRHEIETNHAPLKGDVTVLDTLLAKIPTFREL
SLMHLEALCRFKAAHPHHVFPALYKELFSLDSVLDYTQ