| New model in OGS2.0 | DPOGS213171 |
|---|---|
| Genomic Position | scaffold455:- 35113-37798 |
| See gene structure | |
| CDS Length | 921 |
| Paired RNAseq reads | 431 |
| Single RNAseq reads | 1593 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007360 (2e-129) |
| Best Drosophila hit | CG4389, isoform C (8e-28) |
| Best Human hit | hydroxyacyl-coenzyme A dehydrogenase, mitochondrial isoform 2 precursor (2e-78) |
| Best NR hit (blastp) | 3-hydroxyacyl-CoA dehydrogenase [Bombyx mori] (2e-136) |
| Best NR hit (blastx) | 3-hydroxyacyl-CoA dehydrogenase [Bombyx mori] (3e-122) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0003824 catalytic activity GO:0005488 binding GO:0006631 fatty acid metabolic process GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity GO:0050662 coenzyme binding GO:0070403 NAD binding GO:0008152 metabolic process GO:0005575 cellular_component |
| InterPro families | IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like IPR016040 NAD(P)-binding domain IPR013328 Dehydrogenase, multihelical |
| Orthology group | MCL18466 |
Nucleotide sequence:
ATGAATAATTTGAACGTTATATGTAGAAAGTTTTCCCATTCGGCATCTTTAAATGCTATC
AAAACGGTAACAGTTGTCGGCGGCGGGCTTATGGGTTCTGGAATCGCACAGGTTGCAGCT
CAAGCCGGACAAAATGTAACAATAGTCGATTTGAACTCGGAAATACTTGAAAAAGCTCAG
AAATCTATACAAAACAATCTAGGCAGAGTGGCGAGAAAGCTGTATAAAGATGATCCTTTG
AAAATGGAGGAATTTGTTAAAGAAGCCAATAGTAGAATTAAGGTTTCAACCAAGATTGAA
GATGGTGTGGACGCTGATCTGATCGTAGAGGCCATCGTCGAGTTACTTGAGCCCAAACAG
AAGCTGTTCAACAGATTGGATGAGCTGGCTCCAGAACATACAATTTTAGCGAGCAACACA
TCATCTATATCAATCAATGAGATAGGCAGCGGTATTAAGAGAAAAGATAGGTTTGGTGGG
CTGCACTTCTTCAATCCTGTGCCTGTGATGCGTCTCCTGGAGGTTATCAAGAGCGACCGC
ATGTCCCAAGAGACTTATAACGCCATGATGGAGTGGGGCAAGTCCGTGGGCAAGACCTGC
ATCACCTGCAAAGATACTCCTGGATTTGTCGTCAACAGGCTACTAGGGCCTTACAGTGCT
GAAGCTTTCAGAATGTTTGAGCGAGGTGATGCCAGTAAAGAAGACATCGATATTGCTATG
AAGTTGGGTGCGGGATACCCCATGGGTCCGCTAGAGCTGGCCGACTACACCGGACTCGAT
ACTAACAAGTTCGTCCTCGAGGTGTTGTACCAGAAGACAAAGAACCAAGTGTTTAAGCCG
ATACCGTTACTGAATAAAATGGTGGAAGAAGGCAAACTGGGAATCAAGACCGGGGAGGGG
ATCTATAAATACAAGAAGTGA
Protein sequence:
MNNLNVICRKFSHSASLNAIKTVTVVGGGLMGSGIAQVAAQAGQNVTIVDLNSEILEKAQ
KSIQNNLGRVARKLYKDDPLKMEEFVKEANSRIKVSTKIEDGVDADLIVEAIVELLEPKQ
KLFNRLDELAPEHTILASNTSSISINEIGSGIKRKDRFGGLHFFNPVPVMRLLEVIKSDR
MSQETYNAMMEWGKSVGKTCITCKDTPGFVVNRLLGPYSAEAFRMFERGDASKEDIDIAM
KLGAGYPMGPLELADYTGLDTNKFVLEVLYQKTKNQVFKPIPLLNKMVEEGKLGIKTGEG
IYKYKK