| New model in OGS2.0 | DPOGS213174 |
|---|---|
| Genomic Position | scaffold455:- 14857-18278 |
| See gene structure | |
| CDS Length | 1476 |
| Paired RNAseq reads | 302 |
| Single RNAseq reads | 725 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007364 (0.0) |
| Best Drosophila hit | CG6345 (4e-143) |
| Best Human hit | CDK5 regulatory subunit-associated protein 1 isoform b (2e-143) |
| Best NR hit (blastp) | PREDICTED: similar to CG6345 CG6345-PA [Tribolium castaneum] (2e-178) |
| Best NR hit (blastx) | PREDICTED: similar to CG6345 CG6345-PA [Tribolium castaneum] (4e-163) |
| GeneOntology terms | GO:0000079 regulation of cyclin-dependent protein kinase activity GO:0006400 tRNA modification GO:0051539 4 iron, 4 sulfur cluster binding GO:0016740 transferase activity GO:0005737 cytoplasm |
| InterPro families | IPR020612 Methylthiotransferase, conserved site IPR005839 Methylthiotransferase IPR006463 tRNA-i(6)A37 modification enzyme MiaB IPR007197 Radical SAM IPR013848 Methylthiotransferase, N-terminal IPR002792 Deoxyribonuclease/rho motif-related TRAM IPR023404 Radical SAM, alpha/beta horseshoe IPR006638 Elongator protein 3/MiaB/NifB |
| Orthology group | MCL13442 |
Nucleotide sequence:
ATGAACCTTAATGATACAGAGATTGTTTGGTCGATATTAAAAAAAGAGGGTTTCGAAAAG
ACGGAAGTTGAAGAAGAAGCAGATGTTTTCTTAGTTATGACATGTGCCATCAGGGAAGGC
GCTGAAACAAAAATATGGCATAGATTAGACCACCTGAGAGGCTTCAAGAGAAGGCGTTCC
TTAGCAAAAAATATGAAACCCATCAAAATCGGGATTCTTGGTTGCATGGCGGAACGGTTA
AAGGAGAAGTTAATAGAAAAAGAAAAGGCTGTTGATGTTGTTGCTGGTCCAGATAGTTAC
CGTGATCTTCCTCGACTGCTGGCTGTGACGGAGAGTGGTCAGACCGCTGTGAACGTTCTA
TTGTCACTCGATGAGACATACGCTGATGTGGTCCCAGTTAGGTTGAACAAGGGCAGCGTG
TCCGCCTTTATATCTATAATGCGGGGATGTGACAACATGTGCACATACTGCATCGTGCCG
TTCACCCGAGGTCGCGAGCGATCAAGACCTATCAGTTCTATTGTGGATGAAGTGAAGCAC
TTGTCTGAGAGTGGTGTGAAGGAAGTCACCCTGCTAGGACAGAATGTCAATAGCTACAGA
GATGTTACACAGACTACTGGCAAGTTCGACACTAGCATGGCTAAAGGTTTTAAAACGGTG
TACAAAAACAAGAAAGGAGGTCTTCGGTTTGCAGATCTCCTAGACAAAGTCTCAGCTGTA
GATCCCGAGATGAGAATCAGATTTACAGCAGCGCACCCCAAAGACTTCCCCGATGAAGTG
TTGCAGGTGATATCATCTCGTCCTAACATCTGCAAGTCCCTCCACCTGCCGGCGCAGTCT
GGTTCCAGCGAGGTGTTGGAGCGTATGAGGCGCGGATACACGAGAGAGGCGTACTTAGAA
TTGGTCGAAAGGGTCAGAGAGGTTCTACCAAACGTGGGTCTATCTACCGACATGATCTGT
GGCTTTTGCGGCGAGACTGAAGATCAGTTCCTGGAGACGTTGTCGCTGATGGATATAGTT
GATTACAACGTCGCGTTCCTGTTCCCCTACAGCATGAGAGAGAAAACAACAGCGTATCGC
CGTTACAAAGATGACGTCCCAGAACATGTCAAGAGAGACAGACATCGCAGGATGGTCGAG
TTGTATAGAAGGAAATGTCAGAGAATGAACGAAGCGGAAATAGGGAACATTCACCTCGTG
TTAGTGGAGGGGACGCTCCCCAAGACGGGCCAGTTGCTCGGGAGGAATGAATTGTATATC
AAGGTGGTGCTCGACCGAGCTGTTCTACCGGCAGGCGGAGGAGAGAGGCAGATCGCGCCC
GGAGACTACGTGGCTGTCAGGATACTGTCCGCTAGGTCCTCGGTTCTGACCGGGGAACCT
CTGTACCACACAACTATTGGAGAGTTTTACAGGGACTATGGCTGGGCTGACAGATTTGCT
CGTAAAGGATCATCATCATCATCAACGTTGGGTTGA
Protein sequence:
MNLNDTEIVWSILKKEGFEKTEVEEEADVFLVMTCAIREGAETKIWHRLDHLRGFKRRRS
LAKNMKPIKIGILGCMAERLKEKLIEKEKAVDVVAGPDSYRDLPRLLAVTESGQTAVNVL
LSLDETYADVVPVRLNKGSVSAFISIMRGCDNMCTYCIVPFTRGRERSRPISSIVDEVKH
LSESGVKEVTLLGQNVNSYRDVTQTTGKFDTSMAKGFKTVYKNKKGGLRFADLLDKVSAV
DPEMRIRFTAAHPKDFPDEVLQVISSRPNICKSLHLPAQSGSSEVLERMRRGYTREAYLE
LVERVREVLPNVGLSTDMICGFCGETEDQFLETLSLMDIVDYNVAFLFPYSMREKTTAYR
RYKDDVPEHVKRDRHRRMVELYRRKCQRMNEAEIGNIHLVLVEGTLPKTGQLLGRNELYI
KVVLDRAVLPAGGGERQIAPGDYVAVRILSARSSVLTGEPLYHTTIGEFYRDYGWADRFA
RKGSSSSSTLG