| New model in OGS2.0 | DPOGS215890 |
|---|---|
| Genomic Position | scaffold643:+ 2068-2832 |
| See gene structure | |
| CDS Length | 765 |
| Paired RNAseq reads | 380 |
| Single RNAseq reads | 1031 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000440 (2e-98) |
| Best Drosophila hit | Rlc1, isoform B (6e-67) |
| Best Human hit | 39S ribosomal protein L47, mitochondrial isoform a (7e-30) |
| Best NR hit (blastp) | hypothetical protein LOC100166903 [Acyrthosiphon pisum] (3e-74) |
| Best NR hit (blastx) | hypothetical protein LOC100166903 [Acyrthosiphon pisum] (2e-76) |
| GeneOntology terms | GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0006412 translation |
| InterPro families | IPR010729 Ribosomal protein L47, mitochondrial |
| Orthology group | MCL12791 |
Nucleotide sequence:
ATGAGTCTATTTCGCAATCTTTTGCGACAAACTCGTACATTGAGCCTTCAGATTAATCCA
TGCCGCAGTGGGTATGGAGTTGCTGGTGTTAAAGGTTTTCATACCACAACAAAAAATCAA
GATCTAATGGAATTTTTTGATGAGAAAAAGAACTGGAATGAAAATAATATAAAGGTGGGA
AGATCATGGAAATTAGACGAATTGAGAATAAAATCTAATACAGATTTGCATAAACTGTGG
TATGTGTTGTTGAAGGAACGTAATATGCTGTATACCATGGAACACGAGTGTAATGATCAA
GTTAAATTATTTCCAAATCCAGAGAGAATTGATAAAGTTGAGGAATCAATGAAACATATA
GAGACAGTAGTCAGAGAAAGAAATGTTGCTTATTATCAACTAGAAACAGGGGAAACTGGA
GAACGTCCGGTGGAAGAGGTTGTTAATCTTTTTGGTTTGCCAGAAAATTATTCTCAAAAG
GAGTATTTCCTACCAAAGTTTATGAATACTCGTTGGATCAAGACATATTTAGATCATGGT
TATATCAATAGTGTTGCAGTTAAAAAGTTTTATAGATTGTACAAAGAAAAACAACATAAT
GAGGAGCGTAAAGCCCGTAATAGAGATTTTAATCACGTCCAACATCTTTTAAAACGTTTC
CCTGACATGGATATGGATGCGTTGAAGGCAGAGTACCCTAATGTAGATATAGAAAAGGCT
AAGCGTTCTAAAAAAGCAAGAGGACATTATATGCCAAAGTACTAG
Protein sequence:
MSLFRNLLRQTRTLSLQINPCRSGYGVAGVKGFHTTTKNQDLMEFFDEKKNWNENNIKVG
RSWKLDELRIKSNTDLHKLWYVLLKERNMLYTMEHECNDQVKLFPNPERIDKVEESMKHI
ETVVRERNVAYYQLETGETGERPVEEVVNLFGLPENYSQKEYFLPKFMNTRWIKTYLDHG
YINSVAVKKFYRLYKEKQHNEERKARNRDFNHVQHLLKRFPDMDMDALKAEYPNVDIEKA
KRSKKARGHYMPKY