Genomic Position | scaffold9346:+ 685-1347 |
---|---|
See gene structure | |
CDS Length | 543 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 0 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (5e-72) |
Best NR hit (blastx)   | endonuclease-reverse transcriptase [Bombyx mori] (1e-68) |
GeneOntology terms    | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGGATATTTATTGTACGGCTACAAACCCGAGAGCCAAATTGACCCGACATTTTCCAGCT
CATATCCCAGACATCAGCCTGTTTGAGATTGAGATGGCCCTAAAACAGCTAAAGAACAAC
AAGGCACCGGGTGAGGACGGAATTACTTCTGAACTTCTAAAAGCGGGTGGATCACCGAAC
TACAGACCCATCTCGCTCTTGAACGACGTTTACAAGCTGCTTTCTAGAGTCATTCTAAAT
CGTCTCGAACGCAGGTTTGATGATTTCCAGCCTCCCGAACAACCCGGGTTCCGAAAAGGC
TATAGTACCGTAGACCACATACATGCGCTGCGCCAGGTTATACAGAAGACCGAGAAGTAT
AACTTGCTGTTCTGTCTAGCGTTTGTGGACTACGAAAAAGCGTTTGATTCGGTCGAAACA
TGGACGGTACTGGAGTCTCTCCAGCGATGCCATATTGACTATCGGTATATCGAAATCCTG
AAGTATTTGTATAGAAACGCCACTATGTCGGTCCGACTTCAGAAACAGAGTTCGATATCG
TAG
Protein sequence:
MDIYCTATNPRAKLTRHFPAHIPDISLFEIEMALKQLKNNKAPGEDGITSELLKAGGSPN
YRPISLLNDVYKLLSRVILNRLERRFDDFQPPEQPGFRKGYSTVDHIHALRQVIQKTEKY
NLLFCLAFVDYEKAFDSVETWTVLESLQRCHIDYRYIEILKYLYRNATMSVRLQKQSSIS