| New model in OGS2.0 | DPOGS201880 |
|---|---|
| Genomic Position | scaffold2813:+ 7296-16871 |
| See gene structure | |
| CDS Length | 960 |
| Paired RNAseq reads | 702 |
| Single RNAseq reads | 2258 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006057 (2e-109) |
| Best Drosophila hit | nervana 2, isoform F (3e-94) |
| Best Human hit | sodium/potassium-transporting ATPase subunit beta-3 (7e-18) |
| Best NR hit (blastp) | PREDICTED: similar to Sodium/potassium-transporting ATPase subunit beta-2 (Sodium/potassium-dependent ATPase beta-2 subunit) (Protein nervana 2) isoform 1 [Apis mellifera] (1e-103) |
| Best NR hit (blastx) | PREDICTED: similar to Sodium/potassium-transporting ATPase subunit beta-2 (Sodium/potassium-dependent ATPase beta-2 subunit) (Protein nervana 2) isoform 1 [Apis mellifera] (4e-106) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0005391 sodium:potassium-exchanging ATPase activity GO:0005890 sodium:potassium-exchanging ATPase complex GO:0008324 cation transmembrane transporter activity GO:0006812 cation transport GO:0007424 open tracheal system development GO:0035151 regulation of tube size, open tracheal system GO:0005918 septate junction GO:0019991 septate junction assembly GO:0035158 regulation of tube diameter, open tracheal system GO:0035159 regulation of tube length, open tracheal system GO:0006813 potassium ion transport GO:0006754 ATP biosynthetic process GO:0006814 sodium ion transport GO:0060857 establishment of glial blood-brain barrier |
| InterPro families | IPR000402 ATPase, P-type cation exchange, beta subunit |
| Orthology group | MCL12787 |
Nucleotide sequence:
ATGCCAAATCGTAAGTTAGAAGAATTCGAAATTGAAACAAAACCTCGGAAACGAACCACG
AAGCAGACTATTTGTAACTTCTTGTACAATGAACAAACTGGAGCTATCTTGGGAAGAACG
CCCGACAGTTGGGGTAAAATCATATTATTTTACGTAATATTCTACGCGGTGTTGATCGCG
CTGTTCGCGGTTTGTTTGGCGACATTCCTTCAGCACTTCATCAACCCTCGGGTGCCTCGT
CTGCAACAGGAGCAGGGCTCCATCGGCAGTAGTCCCGGGCTCGGGTTCCGCCCCCTGCCT
CCCGACGTCAGAAGCACCCTGATCTGGTACAAGGGCACGGGAGAGGAGAGTTACAAGTAC
TGGGAGGACGAGCTCAAGGAATTCTTATCAGTGTACAAGAAGAAGGGTCAGACAGCCGGG
GCTGGTCAGAACATCTTCAACTGCGACTTCCGCAACCCGCCGCCGCCCGGGAAGGTCTGT
GACGTGGACATCCGCGGCTGGGAGCCCTGCATCGACGAGAACCACTTCTCCTTCCACAGA
TCCTCGCCCTGCATATTCTTGAAGCTCAACAAGATCTACGGCTGGCGGCCGGAGTACTAC
AACGACACCGACGCCCTCCCCGGCGACATGCCGCCACAGCTGGTCGGGGAGATAAAGAAC
ATCACAAAATATAACAGAGACTATGCGAACATGGTGTGGGTGTCCTGTGCCGGGGAGACT
CCGACGGACCGGGAGAACATCGGCCCCCTGAGGTACATCCCTCATGCCGGGTTCCCGGGC
TACTTCTACCCTTACAACAACGCTGAAGGATACCTCAGCCCGCTGGTGGCTGTTCACCTC
ATGAAGCCCAGGAGTCGCCCGTATCAGATCAACATAGAGTGCCGAGCGTGGGCCAGGAAC
ATCAAATACAACAGGAAGGACCGCCTCGGGGTCGTTCACTTCGAGCTGATGATCGAGTAG
Protein sequence:
MPNRKLEEFEIETKPRKRTTKQTICNFLYNEQTGAILGRTPDSWGKIILFYVIFYAVLIA
LFAVCLATFLQHFINPRVPRLQQEQGSIGSSPGLGFRPLPPDVRSTLIWYKGTGEESYKY
WEDELKEFLSVYKKKGQTAGAGQNIFNCDFRNPPPPGKVCDVDIRGWEPCIDENHFSFHR
SSPCIFLKLNKIYGWRPEYYNDTDALPGDMPPQLVGEIKNITKYNRDYANMVWVSCAGET
PTDRENIGPLRYIPHAGFPGYFYPYNNAEGYLSPLVAVHLMKPRSRPYQINIECRAWARN
IKYNRKDRLGVVHFELMIE