New model in OGS2.0 | DPOGS201886  |
---|---|
Genomic Position | scaffold2813:+ 70001-78908 |
See gene structure | |
CDS Length | 1449 |
Paired RNAseq reads   | 5133 |
Single RNAseq reads   | 22508 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006063 (3e-31) |
Best Drosophila hit   | CG3305 (5e-11) |
Best Human hit | ND |
Best NR hit (blastp)   | GL26666 [Drosophila persimilis] (8e-19) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL010765 [Aedes aegypti] (3e-17) |
GeneOntology terms   | GO:0016020 membrane |
InterPro families   | IPR002000 Lysosome-associated membrane glycoprotein |
Orthology group | MCL14956 |
Nucleotide sequence:
ATGATTCGGTTAAGGTTTTATTTGGTTTGGGCAGTAGTCTGCAGTTCAATGGTTTTCTGT
CAAGGCTCTCTGACACCGCCAAAACCAGTTGTAATACCCGTGCCGGTCCCGTCCCTTGCG
GCAAGTCCTGCGGTTAGCAGTGCTGCGTCTGAAGAACCAAAGATTTCGACGGAAATAATT
TCCACGACAACAAAACCGTCGTCTGAACCAGAACCTACTACTACCACACCTACCACTCCT
CCGACGACTACTTCGACTACTCCTTCAACAACAACTCCAACAACACCTCCGACGACTCCT
CCAACCACAACCCCAACCCCTACAACTACAACCCCGACACCTCCCCCAACGCCCCCTCCG
GCCCCGACACCAGCTCCTGGCCCTCTTCCACCACCACAACAAGGAACTTGGTCCTGGACT
GACAAAAACAATGTGACCTGCATCCTCATTAAGTTCGCTGCTCAGCTGAATGTCACCTAC
CCAATCGATAACTCATGTCAAGGCTCTCTGACACCGCCAAAACCAGTTGTAATACCCGTG
CCGGTCCCGTCCCTTGCGGCAAGTCCTGCGGTTAGCAGTGCTGCGTCTGAAGAACCAAAG
ATTTCGACGGAAATAATTTCCACGACAACAAAACCGTCGTCTGAACCAGAACCTACTACT
ACCACACCTACCACTCCTCCGACGACTACTTCGACTACTCCTTCAACAACAACTCCAACA
ACACCTCCGACGACTCCTCCAACCACAACCCCAACCCCTACAACTACAACCCCGACACCT
CCCCCAACGCCCCCTCCGGCCCCGACACCAGCTCCTGGCCCTCTTCCACCACCACAACAA
GGAACTTGGTCCTGGACTGACAAAAACAATGTGACCTGCATCCTCATTAAGTTCGCTGCT
CAGCTGAATGTCACCTACCCAATCGATAACTCATCGTCTCCGTTGGGCCACCTGGTGATG
AACGTCCCCTCCACCGCCGTGGTGGTGAACGGCAGCTGTGACGGGTCTCAGCAGTGGGTG
AACATCACGTGGCCGGTGTGGGACAAGCCCGCCTCGCCCATGAACAGCATGCTGATGGTG
TTCGCCAACAACGCCACCACCAAGCTCTACTCCCTGGAACATCTCAACCTCTTGCTCATG
CCGGAAGTCTTCCCTAACGCATCATCCGAGATGTTCGTCCACTGGCAGGGCTCCACGTGG
CGAACTCCCCAGGCGACCTCCTACCGCTGCTCCCCTCCCACTCAGCTCAACCTCACAGCC
GATGCCGTGAACCAGGTCGCCACCCTCACCCTGACGCAGCTCCAGGAGGAAGCCTTCCGG
ACATCCGGAAACAGCAGCCAATTCAGTGCTCGTGAGTATACACTAATTAAGATTCTCAAA
CATGACCTCGGTTTAATAAGATATTTGGAAATCTTAACATACAAGCAGGTCTTGATTAAA
TTACATTGA
Protein sequence:
MIRLRFYLVWAVVCSSMVFCQGSLTPPKPVVIPVPVPSLAASPAVSSAASEEPKISTEII
STTTKPSSEPEPTTTTPTTPPTTTSTTPSTTTPTTPPTTPPTTTPTPTTTTPTPPPTPPP
APTPAPGPLPPPQQGTWSWTDKNNVTCILIKFAAQLNVTYPIDNSCQGSLTPPKPVVIPV
PVPSLAASPAVSSAASEEPKISTEIISTTTKPSSEPEPTTTTPTTPPTTTSTTPSTTTPT
TPPTTPPTTTPTPTTTTPTPPPTPPPAPTPAPGPLPPPQQGTWSWTDKNNVTCILIKFAA
QLNVTYPIDNSSSPLGHLVMNVPSTAVVVNGSCDGSQQWVNITWPVWDKPASPMNSMLMV
FANNATTKLYSLEHLNLLLMPEVFPNASSEMFVHWQGSTWRTPQATSYRCSPPTQLNLTA
DAVNQVATLTLTQLQEEAFRTSGNSSQFSAREYTLIKILKHDLGLIRYLEILTYKQVLIK
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