| New model in OGS2.0 | DPOGS201244 |
|---|---|
| Genomic Position | scaffold1387:+ 196-12409 |
| See gene structure | |
| CDS Length | 2685 |
| Paired RNAseq reads | 115 |
| Single RNAseq reads | 946 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012466 (5e-29) |
| Best Drosophila hit | CAP, isoform R (3e-20) |
| Best Human hit | ND |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL012889 [Aedes aegypti] (1e-78) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL012889 [Aedes aegypti] (2e-77) |
| GeneOntology terms | GO:0017166 vinculin binding GO:0005925 focal adhesion |
| InterPro families | ND |
| Orthology group | MCL21805 |
Nucleotide sequence:
ATGGAACCCTGGAGAAAGACAGGCTACCTTTTATCCCAATCCCAAATCTCCATCCCTAAC
TACACGGGTGGAACCATGAAGTGCAGTTCGGATTCAGTGGCCGTAGTAGCAGAGAACAAC
TCTGAAGTTCATGCTGACGAAGACGCGGGCAAAAGCTATCATAATATATATCAAAACGAA
TCTAACACGCCAGCACAACCTCAACCATCCCCCAAAGATAAGAAAGACCTCACATCCGCT
ATACTATCCAAATCTAACATGGCGAGAGCGCTAAAGGAATCCGGCTACGAATCAGATTCT
ACAATAGTTTTCCGACGTCAAGCCGCCCCACTGTCCCCAAGCGAGCGGCGAGCGGCCTAT
CGCGATCTACAAGCCGGGGGTGAACCGCCGCGGGGGGGATTCCGCTCCCCTGCGCCAAAC
AGACAAGAGAGAGTTGCTGAGCTTGAAAAAGCTACCAACAATCAAAATTCTTGTTATAGG
AAAAGAGATGAAGAAATTATTGATTTCGATAGATGGAAAAAAATCCGAACTATAGAAAGA
GCAGAAGAGGAACTGGACAGTTTGTATAAAAAACTAAGAAAAGCTCAAAATGAAAATGAT
GTGTTATTTTATCCAAAGGATGTGAACGATTTGCGCTGGAATTTCAATAAAGAAAGAGGA
TTAAGAATGAAGGAAAAATCAGTGGAGGATTTGAAAGAGGAATTGGAACAAAAAACCAGT
GATCTGGATACTGAATTGGACTGTTTACATAATAAGGATACTTACAAACCTCTCTGGCGA
GGTACAAGTGTTGCCGAAACAGCATTCACTATAAATAGGAAAAATGAAATAGAAAGTAAA
CAGATATGTAATGCTCGAAATACAACAATTAACAGTTTACATGACAATCATTTAAGTGAT
TTAAGAAGAAAAATAGGTCTTGGTAGTCGTTTATGGAGTAGTCTATCTATGGATCAAGTA
AATGCTCTTAAAAATCAGTTGAATGCTATATACAGCAGAGAATTGGAAACAAAACTTGAA
AACAACGACAATTATACCATAACGGTAAAAGACGCAAAAACTGTCAAGCAACCTGACCTT
CACGTACGATGTAATTCCTTAACTTCCCCTAAAACGGAGATAATAATACCAGAAATAAAT
AAATCCGAATCAATTGCAGCTATAAGTTGTCAATTGTCCTCCGAAAAAGAAATAAAAAAT
AATGTAAATAAAATGCAAATGTCTCTCACTGAGACTGAAAAAAAAAAGTTGTCACAATCT
CTAAGTAAAGAACTTTTAAAACGCATTAATAAATTTGACACGCCATCACCAAAATCGGAA
CCGGAAAAGCAAGTGCAGGTAAAAATAGACACAAACAAAACTCATGAAAGTAAATGTTCT
GATATAAATCATAAATTAAATGAAGAAATTATTAAACCAAAAAACGACAACATTAGACAT
CTTATTTTTCCTGTTCCGAAACAGGATACTTCAAATCAATCATCTGCAAGTGAAACAGAT
ACATTAAGCTCCGATATATCAGGAAAAACGGTTATATATAGGGGACCTGCAAAAGAAGTT
CAAAAAAAAGTTCAATATTTTGAATCAGTGAAAGATGAAAACGAACCTCCAGTCACAGTT
CACCTTGCAAAAGATACTGTAATTGAAAAAAATCAGCACATAACGGAACCAGTTAAGAAA
CCGGAGAAAACAGAAAACAAATCAGGGTATAACTCTATTGTTCAATCCCAATCCTGTTCA
GATTTAAAAGAGTTATTCGGAGAGAGTGAAGCAAATAAATTTTTATCTTTACCAGCTCAG
TCTGACCTATATTCGAGAACCCCATCGCCCCAATCGGAAGTACACGTCGATCGAATAACG
CCTGACACGCTACGTTTCTCTAGTGACGAGACAATCTGGCGTAGTCGAACTCCGTCCCCC
GATCCGGAGCGCTACTGGCGTGCATACCTCAAACTGGCACGCGAGGGGGAAGTACGTCGT
CTCGCTCGACGTTTCGATTCACCGTCTGCCGCCGGTGCAGTACTGCGGCGATATCGCAGC
GACCCGGAAATTATAAGAAACGACATAAAAAATAACTGGCCCACAGACAAGGCGTTCAGG
CGGGGAAAATGTAGATCTTTGTTACCAGTGGCTCGTATGCCGCTCCGTCCAAACAATCGT
TTCATGCCACACATTGATGTTATATCTAAATTGGCGGCACTCAGAAAAAGAAACACAGCT
AGGTCTCGGTCTGCTGAAGAAGTTTTAGAATGTCGACCCGGCGAAGTAGAACGTATACGA
CGAAGATTCGAAGCTATGTCGCTGCTTGGGCAAATGTATACCTCAACCCCAGATGTTTGC
GAACTTCAAAATATAACTTCTTATTTGGCTGGACCATGGATAGCACATCGGTATCCAAAG
CCAGAAGATAATAAGAAGCCTATTAGAGATTCAGATAATAACTCGTTACGGGGTCGGACG
ACCTTAAACAAAAAAGACAAAACAAAAACTAAGGGATCCGTAAATTTAAACTCTATCCTT
AAAAGCGATTCATTAGCTAAACAAGCCTTCAATCCCTTGGTTCACCAACCGGCAAGCCGT
TATGAGCCGCCGCGCACACCGCCTCGGCCGCCGTCGGCCGCGTGGCCGTACCGTCTTGCG
CCCTATGTTACACCGTCGCGGCACACAGTCACATTCAAAGGTTAA
Protein sequence:
MEPWRKTGYLLSQSQISIPNYTGGTMKCSSDSVAVVAENNSEVHADEDAGKSYHNIYQNE
SNTPAQPQPSPKDKKDLTSAILSKSNMARALKESGYESDSTIVFRRQAAPLSPSERRAAY
RDLQAGGEPPRGGFRSPAPNRQERVAELEKATNNQNSCYRKRDEEIIDFDRWKKIRTIER
AEEELDSLYKKLRKAQNENDVLFYPKDVNDLRWNFNKERGLRMKEKSVEDLKEELEQKTS
DLDTELDCLHNKDTYKPLWRGTSVAETAFTINRKNEIESKQICNARNTTINSLHDNHLSD
LRRKIGLGSRLWSSLSMDQVNALKNQLNAIYSRELETKLENNDNYTITVKDAKTVKQPDL
HVRCNSLTSPKTEIIIPEINKSESIAAISCQLSSEKEIKNNVNKMQMSLTETEKKKLSQS
LSKELLKRINKFDTPSPKSEPEKQVQVKIDTNKTHESKCSDINHKLNEEIIKPKNDNIRH
LIFPVPKQDTSNQSSASETDTLSSDISGKTVIYRGPAKEVQKKVQYFESVKDENEPPVTV
HLAKDTVIEKNQHITEPVKKPEKTENKSGYNSIVQSQSCSDLKELFGESEANKFLSLPAQ
SDLYSRTPSPQSEVHVDRITPDTLRFSSDETIWRSRTPSPDPERYWRAYLKLAREGEVRR
LARRFDSPSAAGAVLRRYRSDPEIIRNDIKNNWPTDKAFRRGKCRSLLPVARMPLRPNNR
FMPHIDVISKLAALRKRNTARSRSAEEVLECRPGEVERIRRRFEAMSLLGQMYTSTPDVC
ELQNITSYLAGPWIAHRYPKPEDNKKPIRDSDNNSLRGRTTLNKKDKTKTKGSVNLNSIL
KSDSLAKQAFNPLVHQPASRYEPPRTPPRPPSAAWPYRLAPYVTPSRHTVTFKG