| New model in OGS2.0 | DPOGS201245 |
|---|---|
| Genomic Position | scaffold1387:+ 13259-21906 |
| See gene structure | |
| CDS Length | 1782 |
| Paired RNAseq reads | 3207 |
| Single RNAseq reads | 7985 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012467 (2e-173) |
| Best Drosophila hit | CAP, isoform L (6e-84) |
| Best Human hit | sorbin and SH3 domain-containing protein 2 isoform 2 (1e-46) |
| Best NR hit (blastp) | c-Cbl-associated protein isoform A [Bombyx mori] (6e-170) |
| Best NR hit (blastx) | c-Cbl-associated protein isoform A [Bombyx mori] (9e-165) |
| GeneOntology terms | GO:0017166 vinculin binding GO:0005925 focal adhesion |
| InterPro families | IPR001452 Src homology-3 domain IPR000108 Neutrophil cytosol factor 2 p67phox IPR011511 Variant SH3 |
| Orthology group | MCL11795 |
Nucleotide sequence:
ATGAATCAAAACCGCTTAAGCGAACCAGTTTTCGGTAAAAGTTCTGTGTCGGATTATTAT
TATGATGAAGAAATAAATTTTAGAGATCTTCGACTATCTGGCTCTATGTCCAGATCGTTA
AGGGCATTGAACAATTATGTGAAGAAAAACATTTTTTACGATGAAAGTGAGGACCCAGAA
AATGAACACGATAGTGATTATTATTCCAAAGAAACAAGCCCAAACGATTCGGTCTCTTTA
GTGAAAAGTGATTCAGAAAGTGTTTTGAGCGAAGTGTCAAGTGTAAAAGATAAAATAAAT
AACATCCCTACTCATGCAACGGAGGACTCGCATTCCAAAACATCTAACGACCCCACAACT
TTAACCGATGACTATAAATTCAATAAGCTTATTGAAAATGCTTCAAAAACTGAAACACCT
CTTGTGATAGAAAATTCAAATGATATAAATAATAGCAAAGAACTTAAAGAGCCTCCCGTG
CCTAGTACGCGCCATTCACTATCAACTCCTCTCATAGATGAATCTGAGGCAAAGGAAAAA
GATGTTGACCTTGAAAAAGTTACGCTAAGGACAAAAAATATATCAAGAGATAATCGACAC
ACCGTGCACGATGTATCGGAATGGGTAAATAGAACTGATATTTACCCGGATGTTTACGCG
CCCCTGCCGTATAAATCTCCTAACCGCCGCTACATTGAGAGCGACGTGAACATCCATTAC
CGCTGTCCGGTGAGACACGACCCTCTGCCGCTAGTCCCAGAACGCGAGCTGGCGAGGCAG
CAGGCCGATCATATGAAGCGGCTGTACAGGGAGCAGCGCAGGAACAAGTACCTACAGGAG
AACTCCATACATCCGCTCGACATAGAAGCATTCGATGCCTCTATCAAGGAGCTACAAGAT
ATGCAAAATAGGCGTCATCAAGACAACTTTATGCCTTCACAAAAAACTATAGTCCCACTA
AATAGATACGACGAAGCAGAAAGAATAGTCGCTAAAGCGCTCTATACATTCAATGGTCAG
ACCTCGAGAGAATTGAGTTTCAGGAAAGGAGATATTATAAATGTTAGGCGACAAATAGAT
TCTAATTGGTACGAAGGAGAGGTGCACGGAAAAGTCGGATTATTCCCATACAATTACGTA
GAATTAATGAAAGGGGATGGGATTCAAACTTTGAAGAAGACGGCGATAGTCGAGGGTCGA
GCCAAAGCAAAGTTCGACTTCACCGCCCAGACCAACCTCGAGCTGCCGCTGAAGAAGGGC
GAGGTCGTGGTGCTGACGAGACGGATCGATCATAACTGGTGGGAAGGAAGAACTGGCAAT
AAGACCGGCATCTTCCCTGACAGCTACGTCACAATACTACAAGAACCGAGTCAAAGTAGA
CAGGAGCCGGAAAAGCCAGTCGGTACTCCAGCGGCCCATGGTCTCATGAACGGTGACAGA
CCCACGTCACATCGCTACACTCCTCAACATAACAGTCCAGCTCTCTCTAACGCACCCCCC
GCCACAGCGCCGCTACCGTCGCAAGGCTACATTCGCAAGTCTTCATCTACCCGCAGTGCT
GACCTTAACAACACAGAGCCTCTTTACGTTGACACCAACGCTGAAGCTGTTCCTTACCGC
GCCATGTACAAGTATCGTCCCCAAAACCCTGACGAGCTGGAGTTGTTGGAGGGGGAGACG
GTGTACGTCCTCGAGAAGTGTGATGATGGATGGTATGTCGGCTCCAGCCAGAGAACCGGC
CGGTTCGGTACCTTCCCCGGCAACTACGTAGAGCGTATATGA
Protein sequence:
MNQNRLSEPVFGKSSVSDYYYDEEINFRDLRLSGSMSRSLRALNNYVKKNIFYDESEDPE
NEHDSDYYSKETSPNDSVSLVKSDSESVLSEVSSVKDKINNIPTHATEDSHSKTSNDPTT
LTDDYKFNKLIENASKTETPLVIENSNDINNSKELKEPPVPSTRHSLSTPLIDESEAKEK
DVDLEKVTLRTKNISRDNRHTVHDVSEWVNRTDIYPDVYAPLPYKSPNRRYIESDVNIHY
RCPVRHDPLPLVPERELARQQADHMKRLYREQRRNKYLQENSIHPLDIEAFDASIKELQD
MQNRRHQDNFMPSQKTIVPLNRYDEAERIVAKALYTFNGQTSRELSFRKGDIINVRRQID
SNWYEGEVHGKVGLFPYNYVELMKGDGIQTLKKTAIVEGRAKAKFDFTAQTNLELPLKKG
EVVVLTRRIDHNWWEGRTGNKTGIFPDSYVTILQEPSQSRQEPEKPVGTPAAHGLMNGDR
PTSHRYTPQHNSPALSNAPPATAPLPSQGYIRKSSSTRSADLNNTEPLYVDTNAEAVPYR
AMYKYRPQNPDELELLEGETVYVLEKCDDGWYVGSSQRTGRFGTFPGNYVERI