| New model in OGS2.0 | DPOGS210430 |
|---|---|
| Genomic Position | scaffold758:- 99366-107002 |
| See gene structure | |
| CDS Length | 2577 |
| Paired RNAseq reads | 792 |
| Single RNAseq reads | 1904 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012653 (7e-06) |
| Best Drosophila hit | muskelin, isoform A (2e-78) |
| Best Human hit | muskelin isoform 1 (9e-77) |
| Best NR hit (blastp) | PREDICTED: similar to Muskelin [Monodelphis domestica] (3e-165) |
| Best NR hit (blastx) | PREDICTED: similar to muskelin [Nasonia vitripennis] (3e-91) |
| GeneOntology terms | GO:0005515 protein binding GO:0005737 cytoplasm |
| InterPro families | IPR010565 Muskelin, N-terminal IPR011498 Kelch repeat type 2 IPR015915 Kelch-type beta propeller IPR006594 LisH dimerisation motif IPR008979 Galactose-binding domain-like |
| Orthology group | MCL15317 |
Nucleotide sequence:
ATGGATAATAAATGTGAAACGGTTAAACTCTCTTACACCGTACATAGATATTCAAGTTAT
TCTGCCAATTATTTACCGGAAAATATTTTGATAAACAAACCGTCGGACCAGCTTTCGAGA
TGGTTTACAGATAGTTCGACACCCTGCCAGTATATATTGTTAAAACTGGAAAATCCAGCT
ATAGTGGAGTCAATAACATTTGGTAAATATATAAAGGCACATGTCAGTGATCTTAAAAAG
TTTCAAATACTTGGAGGCACAGATGAAAACAACTTGTCATTGTTATTAAAAGCAGGTTTA
AAAAAGGATAATAGTACGGAAACTTTCACATTAAGGCACAGAACCTCAGAAGGATTATTT
TTTCCAGTGCAATACATAAAAATTGTGCCCCTTCAGTCTTGGGGACCAGCATACAATTAC
ACTATATGGTATGTGGAATTAAATGGGAAAAATCAAGAGGATTTTGTAAATAATGCTCTT
GAAACTATCAGCTTGCGTAAAGAAGAAGAGGCAGTTCGAATACTATTGAAGCATCTAAGA
CGAAGACGCTACAAAGATGCATTTGAAGCCTTGACCCGCGAGAGTGGCGTTCAGTTAGAG
GGTCCCATGCAAGGAAGGCTATGGAATGCGCTCGTTGAAAACGGAGATTATGAACTTGCC
GAGCAAATATTTGAAGAGGCTGCTAACAGTGGTGAGTTGGATTGGTACCTGTCCTGGCAG
CCCTATACTCCGGAGTGGAAGCAGTTAGTGCCGTGTTCTAGTGTTGTGGAGGAGCGCCTG
TACTCGGGGGACACGTCTCCTCCCCCACACGCCAGGGCTCAAGATCTGTCCTGCGCAGAC
AGACAACCTCAGATAGATCCATTGGAGGCTAATGGTGTGGAGGCTGGTGGAGTGGATGGG
GCCGTGGGGGGTGCAGGGTGTGTAAGGGGGCCGGGGGGTGACGGTGAGAGTGCAGGGGGT
GGGGAGGCAGCGGCCTCCCCGTGTCTATTACGACCGGTGCCGCGTGGTGGACACCAGCTT
GTAGTGGATCCCAATACAGGTCTTTTATACCTATTCGGTGGTTGGAACGGCGAGGAGGAT
CTAGACGACCTGTGGAGTTTCGACCCTTCGACTGAGTCCTGGAGGCTGTTGTGTCTTCAC
AGCGGAGCAGTTGGCGGTCCTTCGCCTCGCTCCTGTCACAAGATGGTCTTTGATCCTGTA
CACGAGAAGCTGTACACACTCGGGCGGTATCTGGATAATGTGCAACGAGTTCCAGAGAAT
ATGAAGTGCGAGCTGTACTCGTACAGCGTCCGCGAGGGCGTCTGGCGAGTGTCGTGTGAG
GACACGGCGGCCGCGGGCGGTCCACGGCTGGTGTTCGACCATCAGATGTGTCTCGACGCC
AGCGAGCAGACCATATACGTGTTCGGAGGACGAGTACTGCCAGCCAACACTGAGGAGTTG
TCGAGCCCCCAGTACTCCGGTCTGTTCTCGTACCACATCGAGTCTAACGTGTGGAGGTCG
TTAGAGCCCGAGCCTCCCCACCCCGCGCCTCCTCACCGCGTCTCACACTCCATGCTGTTC
CATCCGGTCCAACGACGGCTGTACATGTTCGCTGGTCAGCGTAACAAGGAACAACTAGTG
GACATGTGGTGGTGGGACTGTGAGGAGGCGCCGCCACGGCCGCACGCCCTGTGCACCGCG
CCCCCTCGGGCTCCGCCCCCCCAGGGCTTCACACAGAGGGCGACCATTGACCCACACACC
GACGAGATACATGTACTGTCGGGTATGAGCAAGGAGAAGGACAAGTGCGTGTACAATACT
CTGTGGGTGTTTTCCCTACGACGTATGACCTGGAGTTGCTTGTATAGGAACGACTCAGTG
GAGCCCTCGGAGCCGCGGCCGAGGTTCGCGCACCAGTTCGTCTACGATCCCGTCAGGAAG
GTGCATTATCTGTTCGGTGGTAACCCTGGCCTGACGTCGAGTCCTCGCCTCCGCCTGGAC
GATCTGTGGTCTTTGCGTCTCCACCGCGCGGGCTGCGGCGGAGTGAGGGCGAAGGCTCGC
GCGGCGCTCAGGGAAGCTCGCTACAGGGAGCTCGCCGCCGCCCCTGAACGTGCGCCCGCC
GCTCTACACTACCTGAGACACGCGCTCAGTGAGGCCATCGACCACAGCAGCTCGCTTCAG
GTGGCGCATTTCCAGAAGCTAGCCACGGTACTGTTCTCAGGGAGGACGAGTCCAGACGAA
GATGAGCTCCTGTACGGATCGGAAGCGGCGGGTGCCGGGACTGGGAGACCTCTTGACGTT
GGTCGCGTGAGGACTCTGAGAAGGAGGAGGGCGGCCGCCAGGAGGGACGCTTACCACGCC
GACCTGCCGCGGGCCCTGCTCTCAGTGCTTGGCACGGACGAGCCGCTAGTGGAGCCTAGT
CCGTTCGAAGACGAGTGCCCGTCCCCCGAGCCGGCAGAGGAGCCCCGGGATTCCCGCTCC
AACGAGACCTGGGAGACTCGCGCCGCTCGCATACGTCTGTACGACCGTCTGTGCCGCTAC
TTCCGCCCGTCTGCGGTGCCGCCAGCTGACGACATTCAAAACCTCGTCCACTTGTAA
Protein sequence:
MDNKCETVKLSYTVHRYSSYSANYLPENILINKPSDQLSRWFTDSSTPCQYILLKLENPA
IVESITFGKYIKAHVSDLKKFQILGGTDENNLSLLLKAGLKKDNSTETFTLRHRTSEGLF
FPVQYIKIVPLQSWGPAYNYTIWYVELNGKNQEDFVNNALETISLRKEEEAVRILLKHLR
RRRYKDAFEALTRESGVQLEGPMQGRLWNALVENGDYELAEQIFEEAANSGELDWYLSWQ
PYTPEWKQLVPCSSVVEERLYSGDTSPPPHARAQDLSCADRQPQIDPLEANGVEAGGVDG
AVGGAGCVRGPGGDGESAGGGEAAASPCLLRPVPRGGHQLVVDPNTGLLYLFGGWNGEED
LDDLWSFDPSTESWRLLCLHSGAVGGPSPRSCHKMVFDPVHEKLYTLGRYLDNVQRVPEN
MKCELYSYSVREGVWRVSCEDTAAAGGPRLVFDHQMCLDASEQTIYVFGGRVLPANTEEL
SSPQYSGLFSYHIESNVWRSLEPEPPHPAPPHRVSHSMLFHPVQRRLYMFAGQRNKEQLV
DMWWWDCEEAPPRPHALCTAPPRAPPPQGFTQRATIDPHTDEIHVLSGMSKEKDKCVYNT
LWVFSLRRMTWSCLYRNDSVEPSEPRPRFAHQFVYDPVRKVHYLFGGNPGLTSSPRLRLD
DLWSLRLHRAGCGGVRAKARAALREARYRELAAAPERAPAALHYLRHALSEAIDHSSSLQ
VAHFQKLATVLFSGRTSPDEDELLYGSEAAGAGTGRPLDVGRVRTLRRRRAAARRDAYHA
DLPRALLSVLGTDEPLVEPSPFEDECPSPEPAEEPRDSRSNETWETRAARIRLYDRLCRY
FRPSAVPPADDIQNLVHL