| New model in OGS2.0 | DPOGS210462 |
|---|---|
| Genomic Position | scaffold758:+ 86209-96046 |
| See gene structure | |
| CDS Length | 2184 |
| Paired RNAseq reads | 3603 |
| Single RNAseq reads | 8527 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012641 (3e-57) |
| Best Drosophila hit | bicaudal D (6e-118) |
| Best Human hit | protein bicaudal D homolog 2 isoform 2 (2e-45) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP010206-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | AGAP010206-PA [Anopheles gambiae str. PEST] (9e-132) |
| GeneOntology terms | GO:0007294 germarium-derived oocyte fate determination GO:0048477 oogenesis GO:0007312 oocyte nucleus migration involved in oocyte dorsal/ventral axis specification GO:0030154 cell differentiation GO:0030727 germarium-derived female germ-line cyst formation GO:0007314 oocyte anterior/posterior axis specification GO:0007310 oocyte dorsal/ventral axis specification GO:0016325 oocyte microtubule cytoskeleton organization GO:0007293 germarium-derived egg chamber formation GO:0008103 oocyte microtubule cytoskeleton polarization GO:0007309 oocyte axis specification GO:0045502 dynein binding GO:0008298 intracellular mRNA localization GO:0003729 mRNA binding GO:0005794 Golgi apparatus GO:0051028 mRNA transport GO:0005515 protein binding GO:0050658 RNA transport |
| InterPro families | IPR018477 Bicaudal-D protein, microtubule-associated |
| Orthology group | MCL11653 |
Nucleotide sequence:
ATGGCAGGGACGGCAGATAGTGATTTATCGATTTCCGAGCTGAAGGCGGAGATCGAGAGG
CTTAGTCGAGAGCTTGACCAAGCCAGCAGCGAAAAGATTCAATCGGCACAGCTGGGTCTG
GTGCTGTTGGAAGAGAAAAGTGCCTTGCAGCTGCGATGTGATGAGCTTGAAACTCTCTAC
GAAAACACGAAGCACGAACTGGACATCACACAAGAGGCTTTAATGAAACTAGACACAACA
CAAAAAGTAACTACACAGAGCGGTATAGAACAAGAAAATGCCCTTCTCAATGAATCTGCG
GCTATGGAAAGTTCTCTCACATTACAAATTATTGAATTGGAAGGAGAGACGAAACAGTTA
CGACACGAATTAGAAAGAGTGGTCAGCGAACGAGATAGATTGTTGGCGGAGAGTTCAGAA
CTCGGAGCTGATAAAGCCACGAGGGAATCGGAGAGGGTGGCGTTAAGAGCTGAACTGAGA
GAAGCGAGGCAGCGGGAACAGCGCTTGATAGTTGATATAGGTGATTTAGAAGATGAGAAT
ATATCGCTACAGAAACAGGTCTCGGCGTTACGGTCGTCACAGGTAGAATTCGAAGGTCTG
AAGCATGAGGTGCGTCAATTGCGAGAAGAAGCGGAGAATGCACGCGCAGCCGCTGATGAA
ACCGCAGCGCTGCGGCGTATCGCCGAGAGGCAGCTGGCGGAAGCGCTGGAAGCGCTGCAA
GCGGAACGAGAAGCCAAATTTGCGGCCAAGAAAGAACTGGACGCCCACCTCAGCCGGGAG
GCTCAGTTCAATATAACGAATCTGGCTTACAGTATACGAGGTATGCCAGAGGAAGGCGCT
GATGATGAAGTGGAGGCGGGCGCGTCCGGCGGGGAGCTGGTGGCGGATCATCACGCGGAC
TTGTTCTCAGAGGTCCACCTGCACGAGATATCACGTCTAGAGAAACAACTGGAACAGGCG
CATAACGAAAACTCACAGTTGTCGTCAGCACTGCGGGCGGCGCAGACGAGCGCGGAGACC
GAGAGCGCGGCCGCCGGCGTGCTGCGGGCAGGACTCGCCAGGCTACTGTCCAGGGTCGCA
GCACTGCACACGCTACACGGGGACTGCGCACCCCTGGAGGACGACAAGGTTGAAGGTGGC
GTGGCAGCTCGGGCGGCCAAATGGTTGACGTGGTGGCGCGTGTCGGGCGGAGAGCTGGTG
GCTCTGTTGGCGGCGCTTAAGGAACTAGACTCGCCACTTGCGGACGGGTCGCCGGCCGCC
TTGCAAAGAGCACAGCTCGCACAGCTCAGCGATAGAATGGCAGACGCTGAAATAAGATGC
GCCGCGCTGCAAGCTGACGCCGACCTGTTGAGGACACTCGCTGGAGGCGCCGGCCGCGCG
CTCTCCTCCGCCGCCCCCGCGCTGGCGTCGGCCGCTGACACGCTGGCTCAGCTCTACCAC
CACGTGTGCGCCGTCAACGGCACTCAGCCCGAGCGTCTGCTGTTGGAGCACGCCGGACAA
AACGACGTTACAGACGGGTCCGGTCGTGTGGATGAGGAGGCGTTGGCGCTGGCGGCGGGC
GAGCTGGAGGGTCTGCGGGCGGCCGGCCTCGTGGCCAGGCATGCTGACACACTGCTCGAC
CAACTCACACACCTGAGGGCAGCACTGGACACCGCGCTGGACTCTAGACATAGACACCAA
CCAGTGATGGAGAGCAGCGACCGCGGGGCGGAGCTAGGCGAGCTGCAGGAGCAAGTTATC
AAGCTGAAATCTCTCCTGTCGACCAAGAGGGAGCAGATCGCCACTCTGAGGACCGTGCTC
AAGTCCAACAAGAACACCGCCGAGGTCGCTCTCGCTAACCTCAAGTCCAAGTACGAGACG
GAGAAGACCATCGTCACGGAAACCATGCTCAAACTCAGGAACGAGCTCCGCCTGCTGAAG
GAAGACGCCGCCACCTTCTCCAGTCTTCGCGCCATGTTCGCGGCCCGCTGTGAGGAGTAC
GTGACGCAGGTGGACGAGCTGACGCAGGCCCTGGCCGGCGCCGAGGACGAGAAGAAGACA
CTCAACCAACTGTTGAGACTGGCCGTGCAGCAGAAGTTGTCGCTCACACAACGCCTGGAA
GAACTGGAGGTGGACCGCGAGATGCGCACGCGCCGAGTCCCCAAGGCGGGCGGCGCGGCG
CGAGCTCGGCCGCGAGACTTCTAG
Protein sequence:
MAGTADSDLSISELKAEIERLSRELDQASSEKIQSAQLGLVLLEEKSALQLRCDELETLY
ENTKHELDITQEALMKLDTTQKVTTQSGIEQENALLNESAAMESSLTLQIIELEGETKQL
RHELERVVSERDRLLAESSELGADKATRESERVALRAELREARQREQRLIVDIGDLEDEN
ISLQKQVSALRSSQVEFEGLKHEVRQLREEAENARAAADETAALRRIAERQLAEALEALQ
AEREAKFAAKKELDAHLSREAQFNITNLAYSIRGMPEEGADDEVEAGASGGELVADHHAD
LFSEVHLHEISRLEKQLEQAHNENSQLSSALRAAQTSAETESAAAGVLRAGLARLLSRVA
ALHTLHGDCAPLEDDKVEGGVAARAAKWLTWWRVSGGELVALLAALKELDSPLADGSPAA
LQRAQLAQLSDRMADAEIRCAALQADADLLRTLAGGAGRALSSAAPALASAADTLAQLYH
HVCAVNGTQPERLLLEHAGQNDVTDGSGRVDEEALALAAGELEGLRAAGLVARHADTLLD
QLTHLRAALDTALDSRHRHQPVMESSDRGAELGELQEQVIKLKSLLSTKREQIATLRTVL
KSNKNTAEVALANLKSKYETEKTIVTETMLKLRNELRLLKEDAATFSSLRAMFAARCEEY
VTQVDELTQALAGAEDEKKTLNQLLRLAVQQKLSLTQRLEELEVDREMRTRRVPKAGGAA
RARPRDF