| Genomic Position | scaffold6446:- 5866-6861 |
|---|---|
| See gene structure | |
| CDS Length | 939 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 1 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009954 (4e-10) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | reverse transcriptase [Ostrinia nubilalis] (3e-106) |
| Best NR hit (blastx) | reverse transcriptase [Ostrinia nubilalis] (7e-97) |
| GeneOntology terms | GO:0005198 structural molecule activity GO:0005916 fascia adherens GO:0005515 protein binding GO:0016337 cell-cell adhesion GO:0030027 lamellipodium GO:0003964 RNA-directed DNA polymerase activity GO:0015629 actin cytoskeleton GO:0045296 cadherin binding GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGAAACAAGAGCGTAGTGGTGTTTTTCTTCAAAGAGGTGATAGCACCCTATTGAAGAAC
TACAGACCCATCTCGCTCTTGAGCCACGTTTACAAGCTGTTTTCTAGAGTCATTGTAAAT
CGTCTTAAACGCAGTTTTGATGACTTCCAGCCTCCCGAACAAGCCGGGTTCCGAAAAGGC
TACAGTATCGTAGACCACATACAAACGCTACGCCAGAGTTTGAGGGCGATTCTCTTAAAA
AGAGGCGTAAGACAGAGAGACGCCATATCTCCGAAACTGTTTACGGCCGCTTTGGAAGAC
GCCTTCAAGCTTCTGGAATGGGAAGGACTGGGCATCAATATTAACGGCGAATACACTACT
CACCTTTGTTTTGCCGACGATATCGTAGTCATGGCAAAGTCGATGGAGGAACTCAGTGCG
ATGCTCGAAGGCCTCAATCGAGTCTCCCAACGGGTAGGTCTTAAAAATAACATGGCCAAG
ACGAAATTCATGTCTAATGTCCATGTTGCACCTACCCCTGTTATGGTTGAAAAGTCAGTA
CTTGAAGTTGTTGCCGCGTTTGTATACCTGGGAAAGACAGTCCAGTTAGGAAGGTTCAAC
TTCGAGAAAAAGGTCAATCGCCGAATCCAGCTCGGATGGGCTGCGTTCGGGAAGCTTCGT
AACGTCTTTTCGTTCAAAATACCTCAGTGCATTAAGACGAAGGTATTTGATCAGTGTGTG
TTGCCAGTGATGACGTACGGATCCGAAACGTGGTGCTTCACCAAAGGGCTTATGAACAGA
CTCAGAGTCGCTCAAAGAGCTATGGAGAGATTTATGCTCGGAGTTTCTCTACGGGATCGA
ATTAGAAATGATGAGATACGTAGAAGAACGACAGTCACCGACATAGCTAAACGGAACCTC
AGCTTTTATGGGATGAAGTCAACCTGCCGATTGTGGTGA
Protein sequence:
MKQERSGVFLQRGDSTLLKNYRPISLLSHVYKLFSRVIVNRLKRSFDDFQPPEQAGFRKG
YSIVDHIQTLRQSLRAILLKRGVRQRDAISPKLFTAALEDAFKLLEWEGLGININGEYTT
HLCFADDIVVMAKSMEELSAMLEGLNRVSQRVGLKNNMAKTKFMSNVHVAPTPVMVEKSV
LEVVAAFVYLGKTVQLGRFNFEKKVNRRIQLGWAAFGKLRNVFSFKIPQCIKTKVFDQCV
LPVMTYGSETWCFTKGLMNRLRVAQRAMERFMLGVSLRDRIRNDEIRRRTTVTDIAKRNL
SFYGMKSTCRLW