New model in OGS2.0 | DPOGS214382  |
---|---|
Genomic Position | scaffold829:+ 23678-26534 |
See gene structure | |
CDS Length | 567 |
Paired RNAseq reads   | 1562 |
Single RNAseq reads   | 6405 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004009 (8e-70) |
Best Drosophila hit   | CG12203 (3e-47) |
Best Human hit | NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial precursor (5e-37) |
Best NR hit (blastp)   | PREDICTED: similar to NADH:ubiquinone dehydrogenase, putative [Tribolium castaneum] (6e-58) |
Best NR hit (blastx)   | PREDICTED: similar to NADH:ubiquinone dehydrogenase, putative [Tribolium castaneum] (2e-57) |
GeneOntology terms    | GO:0008137 NADH dehydrogenase (ubiquinone) activity GO:0005747 mitochondrial respiratory chain complex I GO:0022900 electron transport chain |
InterPro families   | IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial |
Orthology group | MCL12701 |
Nucleotide sequence:
ATGCTGCAAGTTATTAATACTGCGGGCAGGCTGGCTAGGTCTAATGTTTGCCGATCCTTG
TTGCCATTTTCAACAAGTTCTGCAAGACCATCAGACGATCCTATGAATCGTAAGGAGGCT
CCTATTCTGGACAACGAATCTGTACTAGCTCTTCCCCACCAAGTAAGGCAGAAGAAAGTC
CAAGCCGCCAGCATAAATGTCCCTGTACAGGTTGACATTACACCAATAACTGGAATACCG
GAGGAGCATGTGCGCACTCGCAGAGTAAGAATCTATCAGCCACCAAAGAACGCTATGCAG
AGCGGCACCAACAACACCCATCATTGGGAAATGGAATTTGATAATCGCCAGCGTTGGGAG
AATCCTCTCATGGGCTGGACATCAACCGGCGATCCTCACTCCAACTTGAAATTGCAATTT
ACCTCCCCCGACGAAGCCATACAGCATTGCGAGAAAAATGGTTGGGTGTGGTACATTGAT
GCTCCCAAACTTGAAAAGGAATTCAAACCCAAAAGCTATGGAATTAACTTCTCCTGGAAT
CGCCGCACCCGAGTATCTACTAAGTGA
Protein sequence:
MLQVINTAGRLARSNVCRSLLPFSTSSARPSDDPMNRKEAPILDNESVLALPHQVRQKKV
QAASINVPVQVDITPITGIPEEHVRTRRVRIYQPPKNAMQSGTNNTHHWEMEFDNRQRWE
NPLMGWTSTGDPHSNLKLQFTSPDEAIQHCEKNGWVWYIDAPKLEKEFKPKSYGINFSWN
RRTRVSTK