New model in OGS2.0 | DPOGS214688  |
---|---|
Genomic Position | scaffold15:- 431359-439522 |
See gene structure | |
CDS Length | 1608 |
Paired RNAseq reads   | 523 |
Single RNAseq reads   | 1290 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001064 (0.0) |
Best Drosophila hit   | polypeptide GalNAc transferase 6, isoform B (4e-140) |
Best Human hit | polypeptide N-acetylgalactosaminyltransferase-like 6 (3e-139) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC008338 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | polypeptide GalNAc transferase 6-like [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
InterPro families    | IPR008997 Ricin B-related lectin IPR000772 Ricin B lectin IPR001173 Glycosyl transferase, family 2 |
Orthology group | MCL10575 |
Nucleotide sequence:
ATGGGAAAGAAATTTTCTAAAAAGGCATTAAGAGAAAGAGGTATTGGTGAACATGGTTTG
CCAGCACATTTGCCAATCAAAGATTCAGAAATAGAGAAGGATTTGTATGCAGTCAATGGT
TTTAATGGGGCCTTAAGTGACAAAATACCATTAAACAGATCTCTACCAGACATCCGTCAT
CCTGGTTGTCAAAATAGGCTGTACATTGAATCCTTGCCGACCGTTAGTGTAGTAGTCCCA
TTTCATAATGAGCATTGGAGTACATTGTTAAGAACGGCATACAGTGTCCTTAACAGATCA
CCAACTTTTCTTATAAAAGAAGTGTTTTTGGTGGATGACGCCAGCACTAAAGACTTTCTT
AAGGAACAGCTTGATGATTATGTATCAAAACATATGCCTAAGGTAAAAATAATCCGACTC
AAATCCAGAAGTGGTTTGATAGCTGCTCGATTAGCCGGTGCGGAGAAAGCTACAGCTGAT
GTCCTGGTTTTCCTTGACTCACACACAGAAGCCAATGTCAACTGGCTACCCCCACTCCTA
GAGCCCATAGCGTTGAATTACAAGACAGTGGTGTGTCCATTCATTGATGTTGTTGCGTAT
GATACGTTTGCGTATCGGGCTCAAGATGAGGGGGCTCGTGGCGCGTTTGACTGGGAACTG
TTCTACAAGCGACTGCCGGTGTTACCAGCTGATGAGGCGAATATGCCAGAGCCATTTCCG
AGTCCAGTAATGGCGGGTGGTCTGTTCGCGATATCACGCGTATTTTTCTGGGAACTTGGC
GGATATGATCCCGGTCTTGATATATGGGGTGGGGAGCAATATGAGCTCAGCTTTAAGTTG
TGGCAGTGTGGTGGAAAAATGTTGGATGCGCCATGTTCTCGTGTTGGACATATTTACAGG
AAATTCGCACCCTTCCCCAATCCCGGCCACGGAGATTTCGTTGGGAAGAATTACAGACGA
GTCGCGGAAGTGTGGATGGACGAATACGCTCAATACTTGTATAAAAGGCGTCCACACTAT
TTGAAAATAGACACCGGCGATATATCCAAGCAGAAGGCTTTGAGGGAGAAACTTCAGTGC
AAACCGTTCAAATGGTTCATGACTCAGATAGCTTTTGACCTGACGGCGAAGTATCCGCCG
GTCGAACCAAAACCTTTCGCAGAGGGACGTATAAGGCCGGCTACATATCCTCATTTATGC
GTGGATGCTCATCATGGCAACCAAATGGACAAGTTACATTTGAAGTCCTGTACAGCATCT
ACATCTGCCGAACAAAACTTTATGCTGTCATGGCATAAGGACATTAAGTCAAAGACTCGG
AATATGTGCTGGGACCTGCCGGATTCTTCTCCAAGGAGTCCTATACTCTTGTACAGTTGT
CACCTGGGGGGAGGAAACCAGCTCTGGAGATATCATCCCGAGTCCAGGCGTCTCAAACAC
GGTACGAACGACAATTGTTTAGATTTTGAAATATCAACGAGATCTGTTTTCATAAAGCAG
TGTTCAGACTCAGAAACCCAGGAGTGGATCATAGATAAAGTAGATAACGCCATGTTGGCG
ACGTGGGATACCATCGCCAAAAGAGTTACTGGTCCCGTTGAGGAGTAA
Protein sequence:
MGKKFSKKALRERGIGEHGLPAHLPIKDSEIEKDLYAVNGFNGALSDKIPLNRSLPDIRH
PGCQNRLYIESLPTVSVVVPFHNEHWSTLLRTAYSVLNRSPTFLIKEVFLVDDASTKDFL
KEQLDDYVSKHMPKVKIIRLKSRSGLIAARLAGAEKATADVLVFLDSHTEANVNWLPPLL
EPIALNYKTVVCPFIDVVAYDTFAYRAQDEGARGAFDWELFYKRLPVLPADEANMPEPFP
SPVMAGGLFAISRVFFWELGGYDPGLDIWGGEQYELSFKLWQCGGKMLDAPCSRVGHIYR
KFAPFPNPGHGDFVGKNYRRVAEVWMDEYAQYLYKRRPHYLKIDTGDISKQKALREKLQC
KPFKWFMTQIAFDLTAKYPPVEPKPFAEGRIRPATYPHLCVDAHHGNQMDKLHLKSCTAS
TSAEQNFMLSWHKDIKSKTRNMCWDLPDSSPRSPILLYSCHLGGGNQLWRYHPESRRLKH
GTNDNCLDFEISTRSVFIKQCSDSETQEWIIDKVDNAMLATWDTIAKRVTGPVEE