| New model in OGS2.0 | DPOGS214689 |
|---|---|
| Genomic Position | scaffold15:- 81961-85424 |
| See gene structure | |
| CDS Length | 1785 |
| Paired RNAseq reads | 2560 |
| Single RNAseq reads | 6497 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005593 (0.0) |
| Best Drosophila hit | Srp68 (9e-151) |
| Best Human hit | signal recognition particle 68 kDa protein (1e-116) |
| Best NR hit (blastp) | putative signal recognition particle 68 kDa protein [Bombyx mori] (0.0) |
| Best NR hit (blastx) | putative signal recognition particle 68 kDa protein [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005786 signal recognition particle, endoplasmic reticulum targeting GO:0008312 7S RNA binding GO:0006614 SRP-dependent cotranslational protein targeting to membrane GO:0003729 mRNA binding GO:0010507 negative regulation of autophagy GO:0007040 lysosome organization |
| InterPro families | ND |
| Orthology group | MCL14306 |
Nucleotide sequence:
ATGGTTGTGTTAGAAGAGAGTGGAGATGCTCAGCCGGTCGCTGCTGACGATGGTTCAAAA
GAAGAAATCAAGTCTAAGAACATGATATCTTTAGAAATATTTCGGGTCATAAAGGATGCC
CAACAGCAGCACGGTCTCCGTCATGGAGATTACCAACGTTACCGCGGCTATTGTTCGCGA
CGTCTAAGACGTTTGCGTAAAGTGCTGAAAATCCCTCAGGGCGATAGACGTCATTACCGT
CGTCGGGACGTCACTTCCTCCCACCTGACAGCTTCGAATGCTGAGAGCCGTCTGCTGTGT
GTACCTTTGCTCCAAGCAGAACGGGCCTGGGCTCATGCCATGCAGCTGAGACAGGAGGCG
AACACAGAGCCAAGGAAGAAGTTCCATCTTGTAGCCAGACTGAAAAAAGCGTGTGCGCAC
GCACAGATGCTTTTACAGCTATCCGAGCAAAGCGGCACGTGCTCTGCGCGTACGCAGCTT
GAGGCGGGCGCTTACGCGGCGTGGTTGCGGGGAGCGCTGCTGTTAGAGTTGCAGCAGTGG
CGTGCAGCTGCTGACTGTCTACGGAGCGCGCAGCTCGTACTTGAGAACTTGTGTAGTGCG
TTGCCGCAAGACGAACAGTTAGTGTACAAGCAGAAGGTGGATGAATTACACCCCAGCCTG
AGGTACTGCGCCTACAACATCGGAGATGAGTCCGCTGCGGGCGACCTTCTGGCGCTGAGG
GGACAAGGACTCATTGATAACTTGGACACCCTCATGGCGCAGGCTAAGGAGTCACGTTCA
GGTGTGATGCACGAGGTGGAGTGGCGCGGTCGTGTGGTGTCCGTACGTCCAGAGAAGGTC
CGGCTGTTCCTGATATCTCTACAAGACCTGGAAACCTCGCTCAAAGCAGCTGTCGACTCA
CAGCACAGGATCGCGCTGCTGGAAAACGTCCTCATGGACTGCAAAGATGCCATCTCCGCA
CTCAAGGATGAGATTAAGAACGATCCCAAACTGAAGAACGCCGAGGCCCAACAAATGTCC
AGCGTCAATTATCTGCTGTCGTATTTAATGTACTTACGTCTGGTCAGGACGGTGGAACGT
AATAACCTTCTAGTACAGCAAGCCGAGGAGGCGCGTCGCAACAACGTACCCATAGATGGG
AAGAAAGTGCGCCCTCAAGACCTGACGCGTTTGTATGAAATCATCTTGCAGAATTACAGC
GAGCTGCAACAACTGCCCGGATTTGAGAACGACCTCGCATACCAGACGGAAATTGACACG
GAAATGAAAGCATACAAGGCGTTCCGATGCTACTATATCGCGCAAGTTTTGACCGGCCTC
CGACGTTTCAGAGAGGCACTCGCCATATTGGAACGATGCAGTACATATACCGCTGAATCG
CTCGCCAGTAAATTAAAGGACAAACAACTCCTTGCGAAGTTAGAGGATTTGCAAAAGGAT
ATAGAAAGCTGTAAGTACGAAGTCCACGCTGACTCGGTGCTCGAAGATGACGAGGAAGAA
GAGACCAAGTACACGAAATCTTACAAAGACAAGAAACCTTTAGTCGATCGGCTCGATGAC
TACCGCGAGGACAGTCAAGTACTGACTAAGAACCCTAACATCTTCAAACTTCCACCTCCC
ATGGAAGCGGTGCCCTGCAAGCCGCTATTTTTCGACTTGGCGTGCAATTTCATCGAGTTC
CCCAATTTGGATGACAAGACCGGAGCTGCCAATAACAAGAAGCAAGGTGCGGGTCTCACT
GGACTCGTGAAGGGATTTTTGGGTTGGGGTAAAGGTGACAAGTAA
Protein sequence:
MVVLEESGDAQPVAADDGSKEEIKSKNMISLEIFRVIKDAQQQHGLRHGDYQRYRGYCSR
RLRRLRKVLKIPQGDRRHYRRRDVTSSHLTASNAESRLLCVPLLQAERAWAHAMQLRQEA
NTEPRKKFHLVARLKKACAHAQMLLQLSEQSGTCSARTQLEAGAYAAWLRGALLLELQQW
RAAADCLRSAQLVLENLCSALPQDEQLVYKQKVDELHPSLRYCAYNIGDESAAGDLLALR
GQGLIDNLDTLMAQAKESRSGVMHEVEWRGRVVSVRPEKVRLFLISLQDLETSLKAAVDS
QHRIALLENVLMDCKDAISALKDEIKNDPKLKNAEAQQMSSVNYLLSYLMYLRLVRTVER
NNLLVQQAEEARRNNVPIDGKKVRPQDLTRLYEIILQNYSELQQLPGFENDLAYQTEIDT
EMKAYKAFRCYYIAQVLTGLRRFREALAILERCSTYTAESLASKLKDKQLLAKLEDLQKD
IESCKYEVHADSVLEDDEEEETKYTKSYKDKKPLVDRLDDYREDSQVLTKNPNIFKLPPP
MEAVPCKPLFFDLACNFIEFPNLDDKTGAANNKKQGAGLTGLVKGFLGWGKGDK