| New model in OGS2.0 | DPOGS214772 |
|---|---|
| Genomic Position | scaffold15:+ 19422-25309 |
| See gene structure | |
| CDS Length | 2586 |
| Paired RNAseq reads | 2607 |
| Single RNAseq reads | 6722 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014440 (1e-142) |
| Best Drosophila hit | RhoGAP92B (4e-66) |
| Best Human hit | rho GTPase-activating protein 17 isoform 1 (5e-94) |
| Best NR hit (blastp) | PREDICTED: similar to nadrin [Apis mellifera] (5e-139) |
| Best NR hit (blastx) | PREDICTED: similar to nadrin [Apis mellifera] (1e-126) |
| GeneOntology terms | GO:0007165 signal transduction GO:0017156 calcium ion-dependent exocytosis GO:0005923 tight junction GO:0005096 GTPase activator activity GO:0005737 cytoplasm GO:0007015 actin filament organization GO:0016020 membrane GO:0030054 cell junction GO:0005626 insoluble fraction GO:0005515 protein binding GO:0005622 intracellular GO:0017124 SH3 domain binding |
| InterPro families | IPR008936 Rho GTPase activation protein IPR004148 BAR IPR000198 Rho GTPase-activating protein domain |
| Orthology group | MCL11219 |
Nucleotide sequence:
ATGAAGAAACAGTTCTATAGAGTTAAGCAACTGGCAGACCAAACCTTTTCAAGGTCTGGT
AAGGAAGAGGCATTGACTGATGAGTTACAAACAGCTGATACAAAAGTAGAGCACCTTCGG
AATGCGTTGCAGCTTATTAGCAAGAGACTCGCGACTGCAGCAGGAAACACACAGGGTCAA
GATCCCGCTGCAAGGGAAAAAAGGCTCAAGAAACTGCCGGAATATCTTTTAGGATTGTCA
ATGTGTGAGGCGAGTAACTATGATGATGATGACAGCATTTTGAAGTACATTCTGTACGAG
TGTGGGAAAACTGAAAAGTTTCTTGCAAACGAAATAGCTGAGCATGAGCTTAAAGTTGAG
CAACTGGTGTGTGCTCCACTCACAGCCATCAGCGATCAGGATGTGCCGGCCATAATGAAA
GCTAAAAAACAACTGAGTAGGCTGATAAGTGAGAAAGAATCAGCGGCGAGCAGATACAAT
CACCTCGAGAAACAGAAAGAAGAAAATCCGACCAAATTAAACGCCGCTAAAGAGGAATTG
GAAGAAGCTGGTAACAAAGTTGAGGCGGCGCGTGACTTACTGGCAGCGGATATGTTCGCT
CTGGTCGCTAAGGAGGCATTACTAGCACACACGTTACTGCAATATGTAAAGTTACAAAGA
GCGTACCACGAATCAGCGCTGCACTCGTTAGCGGATACAGTGCCAGAGCTAGAGAGATTT
ATAAATGACAGTTCAGTGAAGCCGGTTTTCGGATATCCGTTAGAAGAACATCTCCGTGTC
ACTGGACGTACTATAGCGTATCCTATGGAGGTGTGCGTGTGTGCCTTACACGAACTGGCG
CTGAACGAGGAGGGCCTCTTCAGGATAGCCGGCGGTACATCAAAGGTTAGAAGAATGAAG
CTGTCATTGGATGCTGGCCTCTTCAATGTTCCTCTGAAAAGCGACTATAGAGATATGCAC
GTTGTCGCCTCAGTACTGAAGTCATACCTCAGAGAACTGCCCGAACCGTTGTTAACGTAT
CGACTATATGAAAACTTTATACTGGCATCGAGACATCCGACCGAACAAGCCCGACTCAAC
GCTCTCTGGGAGGCCATACATTTATTGCCCGAAGCAAATTTCCACAATCTGAGATACCTC
ATTAAGTTTTTGTCAGCTTTGACACAAAATCAAAGCACCAACAAAATGACGCCGTCTAAT
TTGGCTATCGTGATCGCACCCAACCTGCTCTGGGCCGCTGACGAAAACACGTTCGACATG
AACATCACGACCGCCGTCAACTGCGGGGTGGAGTTGCTCATCAAACACGCCGACTGGTTC
TTCAAGGACGATGTCAACTTCTTCGTGTCCTTCACCAAAGAAGACCTCCTCCCGGATCAC
TTCGGTGCTGAGCAATACGGCTTCACCACCAACTTCGTCCACGGATACAACCAGACGGTC
GCTTTGAATCAGGAACAAAATGGCGATTACAACAGTATGAGCAAGTCCTTATTCGATTAC
AATCACCAGAACGTCGGCAGAAGCACGGTCGACGGCACCGGGAGGCACTCGCGGAGTAAC
AGTCACGACACCAGTCTCATACTACTGGATAATGATATGAAGAAGGCTCAATCGAACAGT
TCCCTGTCCGACCAATCTAGTCCGCCCCACGGCAGTCCCAAGCCTATAATGAGACGGAAG
AATAAGCCGCTGGCCCCGGTACCGCCCAACTTCACACCGGATAAAAATAAGAAGGTCGAA
ACACAAACGCAGACATCGGACGTGGCCAAGGAACAGATTGCGCTCGTCAAGGAAGCGGAG
AAGCCCGCCAAGCCGCCGCGACCGGTCGTGTCGGACACGGGGAAAATAATAACGGGAGTG
CAGACCATCAACAGGTCTACATACAGACAGAGCAAAGCGATGAAAGAGGAGGCAGCGAGG
AGCGGCAGCAGGGAGAACCTCACAGACTCGCGGAGGCAGAGCTTCGAGTTCGAGAAGGAC
AAGTTCGCCGGTCTGAAGGGCACAGACAGGGACACGCTCGTCGTGAAAAACGTGACGGCT
CAGACGGGCATCGTGGCGCGGATGAAGGTCATCGGGGACGGACCGGCGTCACTCGGGGCG
GACCCCGACGTCACGCTGCGGCACAAGCCCGCGGTGCCGGAGAGACCGGCCGCGCTCAGA
CCTCAAAGTTTCCGCTCTCAACGCGCCTCCCTCACAGACGACCGCGAGCCACCGGCCGTT
TTGGAGAGGACACATCTGTACACCGTGGACAGACACCAGCCGGCCATCATCGTGGTAGGA
GGAGAAGACGAGCGGGCCTCGTGCACCGTGCAGAGAACGCACAGCTCCGGGGGCAAGGAC
GAGCTTGAGGAACCGAAGGGACTGACCGGCGCCAGCAGGCAGCTGTCACAGTCCGAGGGG
AACATCACGGACGGCGCGGCGACAGCCCGGCCGCAGGGCTCCCAGCCCTCACGCCCTCCA
CGGCCTCTGGTGCCGGCGCCTCCGCCGCCTGTGGCTGCAACCGCACAGATCGCACAGGCT
GCACAGCAAACACAGACAGCTCAGACGACACAGACAGCGCCTCAGCACGAGAGCACCGAC
CTCTAG
Protein sequence:
MKKQFYRVKQLADQTFSRSGKEEALTDELQTADTKVEHLRNALQLISKRLATAAGNTQGQ
DPAAREKRLKKLPEYLLGLSMCEASNYDDDDSILKYILYECGKTEKFLANEIAEHELKVE
QLVCAPLTAISDQDVPAIMKAKKQLSRLISEKESAASRYNHLEKQKEENPTKLNAAKEEL
EEAGNKVEAARDLLAADMFALVAKEALLAHTLLQYVKLQRAYHESALHSLADTVPELERF
INDSSVKPVFGYPLEEHLRVTGRTIAYPMEVCVCALHELALNEEGLFRIAGGTSKVRRMK
LSLDAGLFNVPLKSDYRDMHVVASVLKSYLRELPEPLLTYRLYENFILASRHPTEQARLN
ALWEAIHLLPEANFHNLRYLIKFLSALTQNQSTNKMTPSNLAIVIAPNLLWAADENTFDM
NITTAVNCGVELLIKHADWFFKDDVNFFVSFTKEDLLPDHFGAEQYGFTTNFVHGYNQTV
ALNQEQNGDYNSMSKSLFDYNHQNVGRSTVDGTGRHSRSNSHDTSLILLDNDMKKAQSNS
SLSDQSSPPHGSPKPIMRRKNKPLAPVPPNFTPDKNKKVETQTQTSDVAKEQIALVKEAE
KPAKPPRPVVSDTGKIITGVQTINRSTYRQSKAMKEEAARSGSRENLTDSRRQSFEFEKD
KFAGLKGTDRDTLVVKNVTAQTGIVARMKVIGDGPASLGADPDVTLRHKPAVPERPAALR
PQSFRSQRASLTDDREPPAVLERTHLYTVDRHQPAIIVVGGEDERASCTVQRTHSSGGKD
ELEEPKGLTGASRQLSQSEGNITDGAATARPQGSQPSRPPRPLVPAPPPPVAATAQIAQA
AQQTQTAQTTQTAPQHESTDL