New model in OGS2.0 | DPOGS214773  |
---|---|
Genomic Position | scaffold15:+ 33089-40938 |
See gene structure | |
CDS Length | 2286 |
Paired RNAseq reads   | 577 |
Single RNAseq reads   | 1520 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005597 (1e-08) |
Best Drosophila hit   | CG8064 (7e-141) |
Best Human hit | WD repeat-containing protein 3 (4e-160) |
Best NR hit (blastp)   | PREDICTED: similar to CG8064 CG8064-PA [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG8064 CG8064-PA [Tribolium castaneum] (0.0) |
GeneOntology terms   | GO:0005634 nucleus |
InterPro families    | IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR020472 G-protein beta WD-40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR019781 WD40 repeat, subgroup IPR015943 WD40/YVTN repeat-like-containing domain |
Orthology group | MCL14780 |
Nucleotide sequence:
ATGGGTTTGACCAAACAATATCTTCGCTACGTACCTAGCGGTACATTCAATGTAATAGCT
AGTCCTGATTGTAATAGCACTCATGTGACTTTAAATGGAGTTAGTGGAAGGTACATTGCA
GTGGGAGCATGTGAACATGTTATTATTTGGGACATGAGATTAGGAGAAAAGGCCCAGGTG
ATACCGGGTGAGAATGTGATGGTGTCCCAAATAGCAGCTAGCTCTAACGGCAACCATATA
GCTGTTGGCTATGTAGATGGCAACATTAATGTGTTCGAGCTGACCAACAATGAAATAGTA
TGTGTGTTTGCGGGACACAAGTCTGCCGTCACTTGTCTTCAGTATGACGAACAAGGCACC
AGGATAGTATCTGGATCAAAGGACACTGAAGTGATTCTCTGGGATGTGGTGTCTGAAACT
GGTGTGGCAAGATTCAGCGGTCACAAGGGAGCCATAACTAGTGTTATGTTCATTAACGGA
AAGAATTGCATTATCAGCTCTTCAAAGGACACATTTGTTAAATTCTGGGACATTGAAACA
AAACACTGCTTTAAAACACTCGGCGGACATCAAATGGAGGTCTGGTCGGCAGTATTACTG
AAGGAAGAGCGTTACTTGGTAACAGGCAGTATGGACCAAGAGCTCAGGGTCTGGAAACTA
AATTGGAAAGAGAAAATAAAAGAAGAAGATAAAATTTCACAGCAATTGGAGATTGTTAAA
ATAGAAGACACAGATAATACTGAAGACAGTTCTATCCTTCAATGTCATCAAGTGGGCACC
TTGATCCGCGGCGGGCGGGGCAGAGTCGTTGGTCTGGAGACGGATCTCGGTCAGACCGTG
CTCGCTTGCTACGGAACAGACTCCCTGTTGGAGCTCTTCGCGTTCTGTTCTGATGATGAA
GCCAAAACTAGAATGAGCAAACGTGTCAAGAAACAGAGGAAGAAGATGACCAAACTGAAG
GAAACCGGTGAAGTTGATATGGAAGTGAGTGAAGTGAGTGAGTTACTGACACTCTCCGAC
GAGGTCCGGAGACTCAGTTCAATCAAACTATCAGCTAAGTTGAAGTCTGCGGCCTTGTTA
CTGGGCACGTCGGGGGAACTCCGTGTGGGCGTGACACTGGCCACCAACACCGTTGAGCTA
CACAGTCTGGCGCTTGAAGACGGGAATGAAGTGACATGTCTGAAGCAGATCACGCTATCT
GGTCATCGTCGTGAGGTCCGCTGCGTATCTCTGTCCTCCGACAACCTCGCCGTGCTGTCA
GCCTCTGCGGACTCTGTTAAACTATGGAACAGAACCAGTCAGGCCTGTCTCCGCACAATA
CCGTTATCAGTCCGACCCACGAGCTCGTGCTTCGCCCCCGGCGATCGACACGCGCTCGTC
TCGTGTTCCGATGGATCTTTACTGCTGTTGGATGTAGCAGCAGCTAACGTCATGGAGAGT
ATCCCAGCCCACGAAGGTGGATGTAGCTGTGTGGGACTCACGCCGGATCTGCGCGGTTGT
TATTCCGGCGGAAGTGACAAAACAGTGAAGTTATGGCAGTTTGAACTCATTCCCGACCCG
ACTGGAGACTCGAAGGCAAAGGTCCTTTCACTGCTACACACCCGCACATTAGAGTTAGAG
GAACAAGTGACTGCGGTGCGGATCAGTCAGAACAACAAATTCATAGCCGTGGCGTTACTA
GATTCAACTGTTAGGATATTCTTTTACGACACTTTTAAGTTCTACATCTCTCTATATGGC
CATAAACTACCGGTGTTGTCTATGGATATAAGTTCGGACTGCAATATCATAGCCACAGGC
TCAGCTGATAGGAACGTTAAAATTTGGGGCTTAGACTTTGGTGACTGTCACAAGTCGATC
TTCGCCCACAACGACTCTATCACGGGTGTGCAGTTCGTTCCCGGGACGCATTACTTCTTC
ACCAGCTCCAAGGACGGGAAAGTCAAGCAGTGGGACGGTGATTCATACGACAATATCATC
ACGCTGGATGGTCATGCTGGCGAATGTCTGAGTTTGTGTGTCGGGGGCGGCGGACTCCAT
GTGGTGTCATGTGGTGGGGACGGAGCTCTAAGACTGTACACGCGCTCAGAGGAGCCCCTG
GTTCTAGGAGACCAGGACGAGAACGAAGAGGGACTCGCTACAGGGGAGCAACATTGGGTC
CGGCGCGAGGCGGAGTCCTCGGCGGGGGAGCAGCTGTTCCGCGACGCGACTGTCGCACGC
AAGTCGCGCGACAGACGTGCGACAGTCGCCCGGGCCAGGAAACGAGCCATCGTCACTATC
ACTTAG
Protein sequence:
MGLTKQYLRYVPSGTFNVIASPDCNSTHVTLNGVSGRYIAVGACEHVIIWDMRLGEKAQV
IPGENVMVSQIAASSNGNHIAVGYVDGNINVFELTNNEIVCVFAGHKSAVTCLQYDEQGT
RIVSGSKDTEVILWDVVSETGVARFSGHKGAITSVMFINGKNCIISSSKDTFVKFWDIET
KHCFKTLGGHQMEVWSAVLLKEERYLVTGSMDQELRVWKLNWKEKIKEEDKISQQLEIVK
IEDTDNTEDSSILQCHQVGTLIRGGRGRVVGLETDLGQTVLACYGTDSLLELFAFCSDDE
AKTRMSKRVKKQRKKMTKLKETGEVDMEVSEVSELLTLSDEVRRLSSIKLSAKLKSAALL
LGTSGELRVGVTLATNTVELHSLALEDGNEVTCLKQITLSGHRREVRCVSLSSDNLAVLS
ASADSVKLWNRTSQACLRTIPLSVRPTSSCFAPGDRHALVSCSDGSLLLLDVAAANVMES
IPAHEGGCSCVGLTPDLRGCYSGGSDKTVKLWQFELIPDPTGDSKAKVLSLLHTRTLELE
EQVTAVRISQNNKFIAVALLDSTVRIFFYDTFKFYISLYGHKLPVLSMDISSDCNIIATG
SADRNVKIWGLDFGDCHKSIFAHNDSITGVQFVPGTHYFFTSSKDGKVKQWDGDSYDNII
TLDGHAGECLSLCVGGGGLHVVSCGGDGALRLYTRSEEPLVLGDQDENEEGLATGEQHWV
RREAESSAGEQLFRDATVARKSRDRRATVARARKRAIVTIT