New model in OGS2.0 | DPOGS214774  |
---|---|
Genomic Position | scaffold15:+ 49726-54076 |
See gene structure | |
CDS Length | 1155 |
Paired RNAseq reads   | 340 |
Single RNAseq reads   | 1022 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005599 (5e-79) |
Best Drosophila hit   | CG7702, isoform B (1e-33) |
Best Human hit | matrix-remodeling-associated protein 5 precursor (2e-13) |
Best NR hit (blastp)   | PREDICTED: similar to leucine-rich transmembrane protein [Acyrthosiphon pisum] (3e-42) |
Best NR hit (blastx)   | PREDICTED: similar to CG7702 CG7702-PA [Tribolium castaneum] (3e-48) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
Orthology group | MCL19459 |
Nucleotide sequence:
ATGTTCCATCTACGAGACTTATATGCAGTGTTAATATTAGCTGGCGTCCTAGTTAACGCG
ACTGCTGGCACAAACGTCCGAAACGAAGCCTGCGATTTATCAGTACAAGATGTAAATAAT
CTGACTTTGAATTGCTCCAGACGAAATATTGAAACAATATCACATTGGCCGGACGAACTA
AATAAAGCCGATGACAAAGACGGTCATGTCCTTATAACTTTCTTCAACAACAGCATCACA
AACATAACTATATTAGATACAATACGAGCCAGTAGGATAGCTATTAGTTTCAAATCTAAT
AGGATAAACGAAATTCAGGATAACGCGTTCAGAAACGTCCACAATCTCGTTTATCTGGAC
CTAAGCAACAACAGACTGTCAGGCGACGTGCTTCGTAGTGAGATATTCCAAGGTCAATAT
AACAACGGCGAACACAGCAGCATAGCTCTGGAGACACTAAACTTGGGTTACAACAGAATA
CACTCTTTGGACAGATATCTATTCCATTTCACACCGAACTTGACTCGTCTGTACCTTAAC
AACAATCCCATAGAGATCTTGGACCATGTCACTGTAATGGCTCTGTCGAGTGCCACTAAA
CTAGAGGTGTTGGATCTATCGAAAACGGATATAGACACAATACCGTTGGATACATTCAGG
GGTCTTTTGAATTTAAGACAAATCGATCTGTCAGGGAATAAGTTTCTTACAGTACCGGAG
AGTTTGAGCCTCGTCGGCAGCACCCTAAAGTATCTCACCTTCAACAACAACCCCATCGTA
GAACTCAATGACGACAGTTTTATTGGTTTGTCAAATCTTCTCGAATTAGAAGTCGGTGAA
AACGATAACTTGGAAGAAGTGAAACGCAGTACGTTCACGCCGTTGAAGAGCCTGCGTGTT
TTGCACCTGTGTCACAATCGCAACTTACGATACATAAGTCATAACGCCTTTCGATTAATC
AAAGACAAATGGACGTTGAAAGAGGTATATCTTGATGAGAATAATCTTAGCGAACTCCCA
ACTGACTTGCTACAATGGAACAGGTTAGAAGTGTTAGGGATGTCAGGCAACAATTGGCTG
TGTAACTGTGATCTAGCAGATATTGTTACAAGACAGGAAGCTGGGACTAAGTTCAGATCT
GGAGAAGTACCTTAG
Protein sequence:
MFHLRDLYAVLILAGVLVNATAGTNVRNEACDLSVQDVNNLTLNCSRRNIETISHWPDEL
NKADDKDGHVLITFFNNSITNITILDTIRASRIAISFKSNRINEIQDNAFRNVHNLVYLD
LSNNRLSGDVLRSEIFQGQYNNGEHSSIALETLNLGYNRIHSLDRYLFHFTPNLTRLYLN
NNPIEILDHVTVMALSSATKLEVLDLSKTDIDTIPLDTFRGLLNLRQIDLSGNKFLTVPE
SLSLVGSTLKYLTFNNNPIVELNDDSFIGLSNLLELEVGENDNLEEVKRSTFTPLKSLRV
LHLCHNRNLRYISHNAFRLIKDKWTLKEVYLDENNLSELPTDLLQWNRLEVLGMSGNNWL
CNCDLADIVTRQEAGTKFRSGEVP