| New model in OGS2.0 | DPOGS214371 |
|---|---|
| Genomic Position | scaffold1894:- 4075-21979 |
| See gene structure | |
| CDS Length | 3951 |
| Paired RNAseq reads | 14254 |
| Single RNAseq reads | 33369 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003985 (0.0) |
| Best Drosophila hit | TER94, isoform A (0.0) |
| Best Human hit | transitional endoplasmic reticulum ATPase (0.0) |
| Best NR hit (blastp) | transitional endoplasmic reticulum ATPase TER94 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | transitional endoplasmic reticulum ATPase TER94 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0045169 fusome GO:0005737 cytoplasm GO:0016887 ATPase activity GO:0005783 endoplasmic reticulum GO:0007029 endoplasmic reticulum organization GO:0007030 Golgi organization GO:0007317 regulation of pole plasm oskar mRNA localization GO:0016320 endoplasmic reticulum membrane fusion GO:0000226 microtubule cytoskeleton organization GO:0045451 pole plasm oskar mRNA localization GO:0042052 rhabdomere development GO:0008103 oocyte microtubule cytoskeleton polarization GO:0008104 protein localization GO:0004252 serine-type endopeptidase activity GO:0005524 ATP binding GO:0004176 ATP-dependent peptidase activity GO:0000502 proteasome complex GO:0006508 proteolysis GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR009010 Aspartate decarboxylase-like fold IPR003593 ATPase, AAA+ type, core IPR005938 ATPase, AAA-type, CDC48 IPR003960 ATPase, AAA-type, conserved site IPR003959 ATPase, AAA-type, core IPR003338 ATPase, AAA-type, VAT, N-terminal IPR019170 Meckelin IPR004201 Cell division protein 48, CDC48, domain 2 IPR015415 Vps4 oligomerisation, C-terminal |
| Orthology group | MCL12163 |
Nucleotide sequence:
ATGTTTTTTGTTTTGATCATATTAAATGGCGTACACGGTTTCAAAGTGCCTGGTAATTGT
GGTACTGGACACTTTTATGAACCAAGCTTGATGGATTGCCTGGCTTGTCCCGCTAATGCA
TCTCTGGTCACGTCAACCGATGTGACTCAAAATTTTGACGGATCTCCGATGAAGGAGGTT
CAATGTGTAAAATGTGCCCGCGGTTATAAAGCTGTGAACAATCGTTGCGTTTGGTGTGAA
GCGTGTTCTTGTAAGAAATATGAAATAGTAGTTAAAGGAAATTGTATACCAAGGAAATAC
GTTCTAGACAGACCTAAGTACTCGGAAAACATATTACATCCAGACGAATCATACGGAAGC
CTAGCGGCTATTACGTCGATAATTGATCGCGATGTCTATAGTGAAGGTGCTTTAAAAGTT
CAGTTACTTCTAGAGATTCAATATGCTTTAAAACATCCGTCATCCGATACCATCACAACA
TCGATCATAGTGGAACATCAAATGCCTGACGCCGGGGTGACAACTAACTTGGAAATATCA
GGAGCTGTGTTATCATCGATCTTTGTGGTTTATAGTTTGGTTCAATGGCGAGGGGCCACG
CGTCGTGGGGCAAATCACTTCATAATAGTGCCTTTATTTTGTGGTTATTTGGCCGATGCT
CTTTATATTGCAACGTTTATTTCATCTCTTCACGCTTTATGCTCGGAAGCTGGGACTCTC
AGTGTAACTCTCCCGCTCTCAAAAGATGAAGAACATCTGATTAGATCAATGATATATGCT
GTTCTTAGTATGAAGTTTCTTAAAGTTTTGTGGATACATTGGAACCAGTGTCGTTGCGAA
GTTATATTCATAGATTGGTCGCAATACAATCCATTAGAACGAGCGCCATCTATTAAAGAG
AATTATTGGAAAATAGACTTGTTGGTTTCCGAACTGATGAGTATGCAGACGAAACGTCGA
GTACCTCCCAGTTATACAGTCACTATTACAGTATTTGCTTTATATCTCCTGAACCAATAT
GAATCTTACCCGTCAAACAGTCAAGGTTATAAATGGGTAATGGCAACATTGGTTTGGTGG
ATCTTCTACTGTTGTGTCTCATTGGTATTTATATTAAAAGAAAAGTTTTTTACGACGAAC
ACAACTAGGTTGGGCAAGCTGTGCATAAATTTAGAAATATCACTGCTGGTGTTCCAATAT
GAATATTATGCACATTATGTGAATGGGCGTAATGATGATTTGGAAATGAGGTCAATATCG
CATACCCTGCCACATTGTCGTCTTATTTGTTCACCACACTTGAGGAACGCTTTCGTTAAA
CTGAAAAACTCCAGTGACTACATTGACGGCCTCGCCAATCAGACTGTTTTATCTCAATTT
CTTGGAGCATTTTTTGAAAGGGCCTTAGATGGTCTCAGCTGGGTTGCCAATGAGAGGACG
GTTTTAGAACGTTTGTTGGACATTGAACTCACAGAGCGTGAAGGCGGAAATACTAGTATT
TTGCTTTACGACAATAACGTATCAATACCGTCACTATTTTCTACCACTTGCCCTGATGAT
CTTTCTACCGCGATCCTGCGCCGTAAAGACAGGCCCAATCGTCTGATCGTCGAGGAGGCC
GTCAGTGATGATAACTCGGTCGTCGCCCTATCACAGGGGAAAATGGAGCAGCTACAGTTA
TTCCGCGGTGACACTGTACTGCTTAAGGGCAAGCGTCGCAAGGAAACTGTATGCATCGTG
CTCTCAGATGACAACTGCCCCGATGAGAAGATACGTATGAACCGTGTAGTTAGGAACAAT
CTGCGCGTTCGTTTGTCAGATGTGGTGTCTATAGCACCCTGTCCGTCAGTCAAATACGGC
AAGCGTGTCCACATACTTCCAATTGATGATTCTGTTGAAGGCCTCACCGGTAATCTATTT
GAGGTGTACTTGAAGCCTTACTTCATGGAGGCCTACCGTCCGATTCACCGTGACGACACG
TTCATGGTGCGCGGTGGCATGAGAGCTGTGGAGTTCAAGGTGGTGGAGACAGACCCCGCT
CCTTACTGTATCGTGGCCCCCGACACCGTCATTCATTGCGAAGGGGAACCTATTAAACGA
GAAGAAGAGGAAGAAGCTCTCAACGCTGTCGGCTACGATGATATCGGCGGTTGTCGCAAG
CAGTTGGCACAGATCAAGGAGATGGTGGAGCTGCCCCTGCGGCATCCCTCGCTGTTCAAA
GCTATCGGCGTGAAACCTCCGCGCGGCATCCTCATGTACGGCCCCCCGGGGACAGGGAAG
ACGCTCATCGCTAGAGCCGTCGCCAATGAGACCGGTGCGTTCTTCTTCCTGATCAACGGC
CCTGAGATCATGTCCAAGCTGGCGGGCGAATCTGAATCCAACCTGCGTAAGGCTTTCGAG
GAGGCTGACAAGAATTCTCCAGCTATCATCTTCATAGATGAGTTGGATGCCATCGCTCCC
AAACGAGAGAAGACACACGGGGAAGTCGAAAGAAGAATCGTGTCACAGCTGCTTACTCTT
ATGGATGGTATGAAGAAGTCGTCTCATGTGATAGTAATGGCCGCCACCAACCGTCCCAAC
TCGATCGACCCGGCGCTGCGGCGCTTCGGACGGTTTGATCGGGAGATAGACATCGGCATC
CCTGACGCCACCGGGCGGCTCGAGATACTGCGCATTCACACCAAGAATATGAAGCTTGGA
GACGACGTGGACCTAGAACAGATTGCAGCTGAATCTCATGGTCATGTGGGTGCCGATCTG
GCTTCCCTGTGCTCGGAAGCAGCTCTGCAACAGATCAGAGAGAAGATGGACCTCATTGAC
CTGGAAGATGACCAGATTGATGCTGAAGTACTCAATTCCTTGGCTGTCTCCATGGATAAC
TTCCGTTATGCGATGACCAAATCCTCTCCATCGGCACTCCGTGAAACTGTGGTGGAAGTG
CCCAACGTAACGTGGACTGACATCGGTGGTCTCCAGAACGTTAAGCGAGAGCTTCAAGAG
CTGGTGCAGTATCCCGTGGAACATCCTGACAAGTTCCTTAAGTTCGGTATGCAGCCTTCC
AGGGGTGTGCTGTTCTATGGGCCGCCGGGATGTGGTAAGACGTTGCTGGCTAAGGCGATT
GCTAATGAGTGTCAAGCCAACTTCATCTCTGTCAAGGGACCAGAGTTACTCACTATGTGG
TTTGGTGAATCCGAGGCCAATGTTAGAGACATCTTCGATAAGGCTCGTTCCGCGTCTCCG
TGTGTGTTGTTCTTCGACGAGTTGGATTCCATCGCCAAGTCCCGCGGCGGGTCCGTGTCG
GACGCCGGCGGCGCCGCCGACCGCGTCATCAACCAGATACTCACAGAGATGGACGGCATG
GGCGCTAAGAAGAACGTGTTCATTATCGGTGCCACAAATCGTCCCGACATCATCGACCCG
GCCATCCTCCGTCCCGGTCGTCTGGACCAGCTGATCTACATCCCTCTACCGGACGAGAAG
TCCCGCGAGGCCATACTGAGGGCCAATCTCCGCAAGTCGCCCATAGCTAAGGACGTTGAC
CTATCCTACATCGCTAAGGTGACACAGGGCTTCAGTGGCGCTGATCTGACCGAGATCTGC
CAGCGCGCCTGCAAGCTCGCCATCAGACAGGCCATCGAGGCGGAGATACACCGCGAGAGG
GCGCGCCAGCAGTCACAACCCGCGGCCGTCATGGATATGGACGAAGAGGACCCGGTACCG
GAGATCAGCCGCGCTCACTTCGAGGAGGCGATGAAGTTCGCGAGACGTTCTGTGTCCGAC
AACGACATCCGCAAGTACGAGATGTTCGCGCAGACGCTGCAACAGAGCAGGGGCTTCGGC
ACTAACTTCAGATTCCCTACAAGTGGTGCGTCAGCGGGCGGGACGGGAACGTCTGGGGGT
GACCAGCCCACTTTCCAGGAGGAGGGGGGTGACGATGACCTCTATAGCTAA
Protein sequence:
MFFVLIILNGVHGFKVPGNCGTGHFYEPSLMDCLACPANASLVTSTDVTQNFDGSPMKEV
QCVKCARGYKAVNNRCVWCEACSCKKYEIVVKGNCIPRKYVLDRPKYSENILHPDESYGS
LAAITSIIDRDVYSEGALKVQLLLEIQYALKHPSSDTITTSIIVEHQMPDAGVTTNLEIS
GAVLSSIFVVYSLVQWRGATRRGANHFIIVPLFCGYLADALYIATFISSLHALCSEAGTL
SVTLPLSKDEEHLIRSMIYAVLSMKFLKVLWIHWNQCRCEVIFIDWSQYNPLERAPSIKE
NYWKIDLLVSELMSMQTKRRVPPSYTVTITVFALYLLNQYESYPSNSQGYKWVMATLVWW
IFYCCVSLVFILKEKFFTTNTTRLGKLCINLEISLLVFQYEYYAHYVNGRNDDLEMRSIS
HTLPHCRLICSPHLRNAFVKLKNSSDYIDGLANQTVLSQFLGAFFERALDGLSWVANERT
VLERLLDIELTEREGGNTSILLYDNNVSIPSLFSTTCPDDLSTAILRRKDRPNRLIVEEA
VSDDNSVVALSQGKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMNRVVRNN
LRVRLSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDT
FMVRGGMRAVEFKVVETDPAPYCIVAPDTVIHCEGEPIKREEEEEALNAVGYDDIGGCRK
QLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLING
PEIMSKLAGESESNLRKAFEEADKNSPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTL
MDGMKKSSHVIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLG
DDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDQIDAEVLNSLAVSMDN
FRYAMTKSSPSALRETVVEVPNVTWTDIGGLQNVKRELQELVQYPVEHPDKFLKFGMQPS
RGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSASP
CVLFFDELDSIAKSRGGSVSDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDP
AILRPGRLDQLIYIPLPDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEIC
QRACKLAIRQAIEAEIHRERARQQSQPAAVMDMDEEDPVPEISRAHFEEAMKFARRSVSD
NDIRKYEMFAQTLQQSRGFGTNFRFPTSGASAGGTGTSGGDQPTFQEEGGDDDLYS