| New model in OGS2.0 | DPOGS214597 |
|---|---|
| Genomic Position | scaffold34:- 156846-159642 |
| See gene structure | |
| CDS Length | 1203 |
| Paired RNAseq reads | 513 |
| Single RNAseq reads | 1574 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005126 (8e-139) |
| Best Drosophila hit | Tryptophanyl-tRNA synthetase, isoform B (6e-149) |
| Best Human hit | tryptophanyl-tRNA synthetase, cytoplasmic isoform a (4e-136) |
| Best NR hit (blastp) | Tryptophanyl-tRNA synthetase, putative [Pediculus humanus corporis] (5e-173) |
| Best NR hit (blastx) | PREDICTED: similar to Tryptophanyl-tRNA synthetase, cytoplasmic (Tryptophan--tRNA ligase) (TrpRS) (Interferon-induced protein 53) (IFP53) (hWRS) [Tribolium castaneum] (1e-165) |
| GeneOntology terms | GO:0006436 tryptophanyl-tRNA aminoacylation GO:0004830 tryptophan-tRNA ligase activity GO:0005737 cytoplasm GO:0005524 ATP binding GO:0007040 lysosome organization |
| InterPro families | IPR002306 Tryptophanyl-tRNA synthetase, class Ib IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR002305 Aminoacyl-tRNA synthetase, class Ib IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL13381 |
Nucleotide sequence:
ATGACTGAGGAGCAAATAAATAATCTATCTATACATGAAGATGATGATGTGGTGGATCCC
TGGAATGTGGCTGGAAAGTCTGAAACGGGGATAGATTATGACAAGCTTATCAAAAGATTT
GGTAGTCAGAAAATAGATGAAGAGGTTATAGCAAGATTCGAGAAGGTTACTGGCAAGAAA
GCACATCACTTCCTAAGACGAGGCATATTCTTCTCTCACAGGGATATCCACAGTATTTTG
AACCTGGTGGAATCCGGAAAGAAGTTATATTTATACACAGGAAGAGGTCCATCTTCAGAT
AGTATGCATATTGGTCATATGATACCATTTATGTTCACAAAGTGGTTGCAAGAAGTGTTT
GATGTTCCACTGATAATACAACTCACTGACGACGAGAAGGTTATGTGGAGGGATATAAAG
GTAGAAGATGCAAGACAGATGGCTTACAGCAACGCCAAGGATATTATTGCTGTGGGATTT
GATCCTTCCAATACATTTATATTCAATGATTTAGATTTTATTGGACAATGTCCAGCATTC
TATCAAAATATGTTGCGGATACAGAGGTGTGTGACATTCAATCAGGTGAAGGGGATCTTT
GGGTTCGGTGACTCGGATGTTATCGGGAAAATTACCTTTCCGTCTATAGAGGCTGCACCT
GCCTTTTCCACTACATTCCCATTCATTTTTGATAATAAAGTGGTACCTTGTCTTGTTCCT
TGCGCCATCGACCAGGACCCGTACTTCCGTCTGACCCGTGATGTAGCTCCACGTCTTCGT
CTCCCAAAGCCAGCGCTTCTGCATGCTACGTTCCTACCAGCCTTACAGGGAGCACAACAC
AAAATGTCTGCAAGTGATCCAAACGCGTCCATCTTCCTTAATGACACTCCGAAGCAGATT
AAGAATAAGATCAACAAGTATGCGTTCTCCGGCGGGCGGGCGACGGTTGAAGAGCACAGA
GAAAAGGGCGGGAACACTGACGTTGACATTTCATACAAATACCTCACGTTTTTCCTAGAA
GATGACGACAGACTAGCTGAGATAAAGAAGCAGTACGAATCTGGCGAAATGTTGACCGGT
GAACTGAAGAAGATAGCCATCGAGACCATAACCCCCATCATCACGGACTACCAGCAGAGG
AGGGTCAAGGTCACCGATGACGTCATGAACGAGTTCTTCGCTATCAGGAAACTCAACTTC
TAG
Protein sequence:
MTEEQINNLSIHEDDDVVDPWNVAGKSETGIDYDKLIKRFGSQKIDEEVIARFEKVTGKK
AHHFLRRGIFFSHRDIHSILNLVESGKKLYLYTGRGPSSDSMHIGHMIPFMFTKWLQEVF
DVPLIIQLTDDEKVMWRDIKVEDARQMAYSNAKDIIAVGFDPSNTFIFNDLDFIGQCPAF
YQNMLRIQRCVTFNQVKGIFGFGDSDVIGKITFPSIEAAPAFSTTFPFIFDNKVVPCLVP
CAIDQDPYFRLTRDVAPRLRLPKPALLHATFLPALQGAQHKMSASDPNASIFLNDTPKQI
KNKINKYAFSGGRATVEEHREKGGNTDVDISYKYLTFFLEDDDRLAEIKKQYESGEMLTG
ELKKIAIETITPIITDYQQRRVKVTDDVMNEFFAIRKLNF