New model in OGS2.0 | DPOGS214599  |
---|---|
Genomic Position | scaffold34:- 113115-120860 |
See gene structure | |
CDS Length | 2358 |
Paired RNAseq reads   | 3505 |
Single RNAseq reads   | 11094 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005129 (0.0) |
Best Drosophila hit   | papilin, isoform C (0.0) |
Best Human hit | A disintegrin and metalloproteinase with thrombospondin motifs 6 preproprotein (6e-85) |
Best NR hit (blastp)   | lacunin [Manduca sexta] (0.0) |
Best NR hit (blastx)   | lacunin [Manduca sexta] (0.0) |
GeneOntology terms    | GO:0005604 basement membrane GO:0005578 proteinaceous extracellular matrix GO:0030198 extracellular matrix organization GO:0005201 extracellular matrix structural constituent GO:0008270 zinc ion binding GO:0004222 metalloendopeptidase activity GO:0004867 serine-type endopeptidase inhibitor activity |
InterPro families    | IPR000884 Thrombospondin, type 1 repeat IPR013273 Peptidase M12B, ADAM-TS IPR010294 ADAM-TS Spacer 1 |
Orthology group | MCL10728 |
Nucleotide sequence:
ATGGAATCTCTTCGCACATGCCGGGACTTCACAGCTTCCTCCCAAGTTACACAGTTTATT
GCTGCTGTTTTGTTATCGCTGTTATTGGCAGCCTTCTTGCTAAGTAACGTCTCCTGGTCA
ACGTCCAGACACCACTTTAGGCACAACATTCATGGACACAGAAGCAGACATAGGCGGCAA
GATGCAGGTTTGTTTCACCCGGCTTCTTACGTAATACCGGGGGGCGAGGGAACCGGGGTG
TGGGGAGAATGGGGCAAAGTATCTCCCTGTTCCAGGACTTGTGGTGGAGGAGTCGCCAGT
CAAAAGAGGATTTGTCTTGAAGTTGGTCTAGATAATCAGCCTCTCTGCACTGGTGGAGAC
ACAAAATACTTCTCGTGTCAAACTCAAGACTGTCCAGAAAGTGCCGGAGACTTCAGAGCT
GAGCAATGCGCTGAGTATGACAACCAGGCGTTTAGAGGCAGCGGAATAAAATATAATTGG
GTGCCGTACACTAAGGCCCCAAATCCGTGCGAGTTGAACTGCATGCCTCGTGGGGAACGG
TTCTACTACCGGCAGAAAGCTCAAGTCATTGACGGTACTCGCTGCAACGATGAATCTTTC
GACGTTTGTGTTGATGGAGTCTGTCAGCCTGTTGGATGTGATATGATGTTGGGATCGAAC
GCACGGGAAGATAAATGCAGACAGTGTCGGGGCAATGGGACCAACTGCCACACAGTCAGC
GGTCTTCTAGACACGGATGACCTTCGAAAAGGTTATAACGACATGTTACTTATACCTCAA
GGTGCTACGAATATTTTCATTGAGGAAGTCAGAGAATCTAACAATTATTTAGCGCTGAGA
GCGAAACAAGACAATGTGTACTATCTGAATGGAGACTACCATATAGATTTTCCAAGAAGT
CTAGTTATTGCTGGATCATTATGGCATTACGAACGCAGTCAACAAGGTTACGCCGCACCA
GATAAACTGAGATGTCTCGGTCCCACGGACGAACCGCTCTATCTCTCGCTGCTCTTACAA
GACTACAACGTTGGTATCAGCTACGAGTATAGCGTCCCCACTGCTTTAGCTCCTCCTTCA
AACCAGCAATACAACTGGGTTCATGAATCCTTCTCTGAATGTAGTGCAACATGTGGTGGA
GGATATCAAACTCGTCAAGTGACATGCCGGTCCAGAGAAGAATTAAATATAGTAGATGAG
AGTTTGTGCGACGAGGGTCTTAGACCGGCTACAAACCAGACATGCAATATAGAGGCCTGT
CCGCCTCGCTGGGTAGAAGGACCTTGGAGCCCTTGCTCTAAGCCTTGCGGCGACGGTGGA
ACGAGATCACGACAGATCTACTGCGAAAAAATTATTACGAACAGGTTTCCATCAATAGTG
GCGGATAAGGAGTGCTTCGATCTCCTCGGACCCAAGCCTGAGTTGTATCAGACATGCAAT
GAGAACGCCACCTGTCCTACTTGGTTCACGGGACCCTGGAAGCCGTGTGATAAGTTATGC
GGAGAGGGTAAACAAACACGACAAGTTGTGTGCCATCAAAGAATCGATGGGTTCGTTCGA
ATATTCGAAGACAGTGAATGTGAGGATGAAAAACCGATGGCCGAGAAGAAATGTATTTTA
CACCCCTGCGATGGAGTCGACTGGGTTCTGTCCGATTGGTCTGGATGCGACACATGTTTG
TCTTCGGTCCGCACTCGGGTGGCTCTCTGCGCTACCAAGGATCGTAAAGTAGTAGATTCA
GAATTATGTTCATATCACCCAAATCCATTGTTGGTGGAGGAGTGTGATCGCACCAAGCTA
CCGCCTTGTCAGGTGCAGTGGTACGCCACTCAATGGAGCAATTGTTCAGTGGAATGCGGC
AAGGGCGTGCAAACTCGTAGAGTATTTTGTGGTCTATTTGACGGTGCTTCTGTTATGAAA
GTCGACGACGAGAGATGCGACCAAGAATACAAGTATAACAGTACGAAAGAATGCGAGGTA
CCGCAGGAAAAATGTCCCACCAAATGGTTCGCGGGTCCCTGGTCTGAGTGCACTAAAAAA
TGCGGCGGCGGTGAACAATACCGTCGGGTGATGTGTCTGGGTGGTGGTAAAGAGATTCTC
ATGTGCGATAAGGAAACCGTACCAGACTCCACACAATCGTGTAACATCGGACCCTGCGAC
AAAGATGACTTGCTACCGATCGACTCAAAGTCTACTCCGATAATGGATGATTATGATGAT
GAAGAATGCGTCGTCGAAGATTATGAGTATCCGGAAGAGGGAGCCGAGGCTTACGTGTCT
GAGGCATCTGGAAGCCCGACCCTGTTCCCTGAATTCATCTTTGGCGGTAAGAATGTAACC
TATAAATTATTGATATAA
Protein sequence:
MESLRTCRDFTASSQVTQFIAAVLLSLLLAAFLLSNVSWSTSRHHFRHNIHGHRSRHRRQ
DAGLFHPASYVIPGGEGTGVWGEWGKVSPCSRTCGGGVASQKRICLEVGLDNQPLCTGGD
TKYFSCQTQDCPESAGDFRAEQCAEYDNQAFRGSGIKYNWVPYTKAPNPCELNCMPRGER
FYYRQKAQVIDGTRCNDESFDVCVDGVCQPVGCDMMLGSNAREDKCRQCRGNGTNCHTVS
GLLDTDDLRKGYNDMLLIPQGATNIFIEEVRESNNYLALRAKQDNVYYLNGDYHIDFPRS
LVIAGSLWHYERSQQGYAAPDKLRCLGPTDEPLYLSLLLQDYNVGISYEYSVPTALAPPS
NQQYNWVHESFSECSATCGGGYQTRQVTCRSREELNIVDESLCDEGLRPATNQTCNIEAC
PPRWVEGPWSPCSKPCGDGGTRSRQIYCEKIITNRFPSIVADKECFDLLGPKPELYQTCN
ENATCPTWFTGPWKPCDKLCGEGKQTRQVVCHQRIDGFVRIFEDSECEDEKPMAEKKCIL
HPCDGVDWVLSDWSGCDTCLSSVRTRVALCATKDRKVVDSELCSYHPNPLLVEECDRTKL
PPCQVQWYATQWSNCSVECGKGVQTRRVFCGLFDGASVMKVDDERCDQEYKYNSTKECEV
PQEKCPTKWFAGPWSECTKKCGGGEQYRRVMCLGGGKEILMCDKETVPDSTQSCNIGPCD
KDDLLPIDSKSTPIMDDYDDEECVVEDYEYPEEGAEAYVSEASGSPTLFPEFIFGGKNVT
YKLLI