| New model in OGS2.0 | DPOGS214624 |
|---|---|
| Genomic Position | scaffold34:+ 160410-161668 |
| See gene structure | |
| CDS Length | 771 |
| Paired RNAseq reads | 112 |
| Single RNAseq reads | 506 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005074 (1e-84) |
| Best Drosophila hit | spastin, isoform B (9e-42) |
| Best Human hit | spastin isoform 2 (2e-15) |
| Best NR hit (blastp) | PREDICTED: similar to spastin CG5977-PA [Tribolium castaneum] (4e-59) |
| Best NR hit (blastx) | PREDICTED: similar to spastin CG5977-PA [Tribolium castaneum] (2e-56) |
| GeneOntology terms | GO:0005813 centrosome GO:0008017 microtubule binding GO:0008568 microtubule-severing ATPase activity GO:0016887 ATPase activity GO:0051013 microtubule severing |
| InterPro families | IPR007330 MIT |
| Orthology group | MCL23991 |
Nucleotide sequence:
ATGGTTTCGGGTGACGATTTCAATGGTGGTCGTTTATCGCGAAAAACTACTAGGTCCCCA
AACCGAAAATCTAAGAAGACCGATGCAGACATAGCAAAGGGATCAGCGTTGCGAAATGAT
TCGCAACCTTCTGTCCACAAGAGGAACCTTTATGTAGTCTCCTTCCCAATCATTATTCTC
TTTAATTTGTTGAGGCCTCGTAAGAACGGCGAATGTAACTTAGAAGTGGTGGTTAAAGAC
GGTGTTGTGTCAACTGAGATCGCGCACAGTGAAGAGATGTCGTATATAAACAATGTAGGC
CCCGGGGATCCTCTTCTTGCCAAACAAAAACATCATCATCGAAAAGCTTTTGAGTACATA
TCAAAAGCGTTGAAGATTGACGAAGAAAATGAGGGACAAAAAGAATTAGCAATAGAACTG
TACAAGAAAGGTATCTATGAATTGGAGCGAGGGATTGCAGTAGACTGCTGGGGGGGTCGG
GGCGACGCCTGGCAGAGGGCCCAAAGGCTCCATGATAAGATGAAAACCAATCTAGGCATG
GCCAAGGATCGTTTACATTTCCTCGCCAACCTAGTCGCCCTCAGTAAGTTGGGGGTAGAG
AGTGAGCCTGAGAGAAGTGAAAAAAGACCTACGGAGTCTCCTCTTAAAGTGAGAAGGCCA
TTAGAGAAGTCCAAGACAACGCTACTAGCACACACAGAAAGTAACAGTGGTCAAACGAAG
CCACCAAATGAAGGTAGAATACTAAACATAGCTTTGCTTCGTTTGACGTAA
Protein sequence:
MVSGDDFNGGRLSRKTTRSPNRKSKKTDADIAKGSALRNDSQPSVHKRNLYVVSFPIIIL
FNLLRPRKNGECNLEVVVKDGVVSTEIAHSEEMSYINNVGPGDPLLAKQKHHHRKAFEYI
SKALKIDEENEGQKELAIELYKKGIYELERGIAVDCWGGRGDAWQRAQRLHDKMKTNLGM
AKDRLHFLANLVALSKLGVESEPERSEKRPTESPLKVRRPLEKSKTTLLAHTESNSGQTK
PPNEGRILNIALLRLT