New model in OGS2.0 | DPOGS214624  |
---|---|
Genomic Position | scaffold34:+ 167636-170980 |
See gene structure | |
CDS Length | 1131 |
Paired RNAseq reads   | 696 |
Single RNAseq reads   | 1790 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005075 (2e-177) |
Best Drosophila hit   | spastin, isoform B (2e-120) |
Best Human hit | spastin isoform 1 (2e-105) |
Best NR hit (blastp)   | PREDICTED: similar to spastin CG5977-PA, isoform A [Apis mellifera] (2e-147) |
Best NR hit (blastx)   | PREDICTED: similar to spastin CG5977-PA, isoform A [Apis mellifera] (2e-141) |
GeneOntology terms    | GO:0005813 centrosome GO:0008017 microtubule binding GO:0008568 microtubule-severing ATPase activity GO:0016887 ATPase activity GO:0051013 microtubule severing |
InterPro families    | IPR003960 ATPase, AAA-type, conserved site IPR003959 ATPase, AAA-type, core IPR003593 ATPase, AAA+ type, core |
Orthology group | MCL13994 |
Nucleotide sequence:
ATGAAATCTCAGACCCTGCCGCGATCCATGGGCAGGTCTTCGTCACAGCCCAACAGCTCC
AATGGCTACACCAGATACCCTGTGAAACCAGCATCAACACCGCCTGCTGTAAAACGACAG
CTGTCGGTACCAGTGAACGGGTCTCCTGTTCGGCGTGCTGCAGGAGGGGGCTCGCAGCGC
GGGACGCCCACCAGAAGTAGAACCCCGCAACCCACACTCGCAGTTCGGGGCGTGGACCCG
AAACTCGTCCAATTGATATTGGACGAGATCGTTGAGGGAGGCCCTAAGGTTCATTGGGAA
GATATCGCTGGGCAGGAGGCAGCAAAACAAGCGCTACAGGAAATGGTAGTGCTGCCGTCG
CTCCGACCGGAACTGTTCACTGGTCTGAGATCACCGGCACGAGGTCTGCTGTTATTCGGT
CCCCCCGGTAATGGTAAGACGTTGCTGGCTCGATGCGTGGCGGCGGAGTGTTCCGCCACG
TTTTTCTCGATATCGGCCGCGTCACTCACCAGCAAGTATGTGGGTGACGGGGAGAAGATG
GTGAGGGCGCTGTTCCAGGTGGCCAGGGAACTACAGCCATCGATAATCTTCGTGGACGAA
GTGGACTCGTTGCTTTGCGAGCGATCGACGGGCGAGCATGAGGCGTCCAGGAGATTGAAG
ACTGAGTTCTTGGTGGAATTCGACGGCCTGCCAGCCGCCGGCGCTGACAGGGTCATTGTG
ATGGCGGCCACCAACCGCCCACAAGAGCTGGACGAAGCTGCTCTCAGACGGTTCCCCAAG
CGTGTGTACGTATCATTACCTGATAGCCGCACACGCGGGGCCCTGCTCCGGAGGGTGTTG
ACGAGGGGTGCTGCGGCGGCCGCGATCAGTGACGACGAGCTGGCGCGCCTCGCCGCCCTC
ACCGATGGCTACTCCGGCAGCGACCTCACCGCCCTCTGCCGGGACGCCGCTCTGGGACCC
ATACGGGAGTTAGACCCGGAGGAAGTGAAATGCTTGGACCTGTCGCTGGTTCGTAGCATC
ACGTTCCAGGACTTCATGGACGCTCTCAAGCGGATCCGACCTTCGGTGTCACCTCTCAGC
CTCGTGGGCTACGAGAAGTGGTCCGTGCAGTACGGGGAACTGGGAGTGTGA
Protein sequence:
MKSQTLPRSMGRSSSQPNSSNGYTRYPVKPASTPPAVKRQLSVPVNGSPVRRAAGGGSQR
GTPTRSRTPQPTLAVRGVDPKLVQLILDEIVEGGPKVHWEDIAGQEAAKQALQEMVVLPS
LRPELFTGLRSPARGLLLFGPPGNGKTLLARCVAAECSATFFSISAASLTSKYVGDGEKM
VRALFQVARELQPSIIFVDEVDSLLCERSTGEHEASRRLKTEFLVEFDGLPAAGADRVIV
MAATNRPQELDEAALRRFPKRVYVSLPDSRTRGALLRRVLTRGAAAAAISDDELARLAAL
TDGYSGSDLTALCRDAALGPIRELDPEEVKCLDLSLVRSITFQDFMDALKRIRPSVSPLS
LVGYEKWSVQYGELGV