| New model in OGS2.0 | DPOGS200737 |
|---|---|
| Genomic Position | scaffold402:+ 11155-16218 |
| See gene structure | |
| CDS Length | 3435 |
| Paired RNAseq reads | 2430 |
| Single RNAseq reads | 5616 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001037 (0.0) |
| Best Drosophila hit | CG33123 (0.0) |
| Best Human hit | leucyl-tRNA synthetase, cytoplasmic (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG33123-PA isoform 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG33123-PA isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0004823 leucine-tRNA ligase activity GO:0005737 cytoplasm GO:0005524 ATP binding GO:0006429 leucyl-tRNA aminoacylation GO:0005875 microtubule associated complex |
| InterPro families | IPR004493 Leucyl-tRNA synthetase, class Ia, archaeal/eukaryotic cytosolic IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold |
| Orthology group | MCL12566 |
Nucleotide sequence:
ATGGAAGCGCCGGATGACGGAAAAGACTATGAGAAGTTTTTGTGCACCTTTCCTTATCCA
TATATGAACGGACGTTTACACCTCGGACACACATTTTCATTATCAAAATGTGAGTTTGCC
ACCAGGTACTACAGGTTAAAAGGGAGGAAGGTTCTTTTTCCATTTGGTTTCCACTGCACC
GGAATGCCTATCAAAGCATGCGCTGATAAGCTTAAAAGAGAAATGGCATTATATGGATGC
CCACCAATCTTTCCCGATGACGAAATTGTAGAAGAAAAGGAACAAGGGGATATAGTCCCT
AAAGATAAAAGTAAGGGCAAAAAAAGCAAAGCCGTGGCTAAGACAGGAGCTGCAAAGTAT
CAGTGGCAGATCATGCAGAGCATTGGAGTTCCCGAGGAGGAAATTAAGGAGTTTGCTAAT
GAGAGTTACTGGCTGGAGTACTTCCCACCTCGTGCCGTAGCTGACTTAAAAAGGATGGGA
ATCCATGTTGACTGGCGTAGAAAATTCATAACAACAGATGCGAATCCATTCTATGATTCA
TTCATCAGGTGGCAATTTCATCATCTGAAACAACGGAATAAGATTATGTATGGCAAACGC
TATACTATATTTTCTCCGCTAGATAAGCAACCTTGCATGGACCATGACAGAAGTACTGGC
GAAGGAGCTGGGCCACAGGAATATACACTTATTAAAATGGAAGTTTTGGAGCCTTTTCCT
GAAGTTTTAAAACAATTTCAGGGTAAAACCTTAAACTTTGTAGCGGCAACACTCCGGCCT
GAGACCATGTATGGCCAGACAAACTGTTGGGTCCATCCTGAAATTAAGTATATTGCATTT
GAAACTGTCAAACACGGTGTGTTCATATGTACAAGACGAGCAGCTCGGAACATGTCGTAT
CAAGGATTTACCGAAAAAGATGGCGAATATAAAATCATTGCTGAAATTGTAGGGCTGGAT
CTATTAGGTGTGGCCTTGAAATCACCATTTACTTGCTATCAGAAAATTTACTCGCTTCCG
ATGTTAACAATTAAGGAGGATAAAGGAACGGGAATCGTTACCAGCGTGCCGTCTGATTCT
CCCGATGATTACGCCGCATTGGTTGACCTACAAAAGAAAGCCCCGTTCAGAGAAAAGTAC
GGCATCCAAGACTATATGGTCATGCCATTTAAGCCTGTCTCCATATTAGAAATACCTGAA
TTCGGTAACCTCACAGCCGTGTTCCTATATGATAAACTTAAAATCCAAAGTCAAAATGAC
AAAGATAAACTGACCCAGGCCAAAGAAATGGCGTACCTGAAAGGATTTTACGACGGCGTG
CTACTGGTCGGTGATTACAAAGGCGAGAAAATTCAGGATGTGAAGAAAAAATTGCAACAG
AGGCTGATAGATGATAACTCCGCTGTAATCTATTACGAACCGGAAAAGACAATCATTTCC
AGATCCGGTGACGAATGCGTTGTCGCACTTTGCAATCAATGGTATTTGGATTATGGTAAT
GCAGAATGGAAGGGCCAAGCAGAAAAAGCTTTGGCCGCAATGAACACGTATCACGATGAA
GTGAGGAAAAACTTCCAGGCTACTCTTAAATGGCTTCACGAGTATGCTTGTTCCCGTACC
TACGGTCTCGGCACCAAATTGCCGTGGGACACGCAATGGGTCATCGAATCGCTCTCCGAC
TCGACTATATACAACGCGTACTACACTATATCCCATTATCTGCAAGGCGACAGCTTTAGG
GGTAATGTCGAAAATGATTTGAAAATTAAACCCGAAGAGATGTCGATTGAAGTTTGGGAT
TATATTTTCTTCAAAGACGCTCCCATACCTAAGAACACGAAAATATCTAAAAATAAATTA
GATCTGATGAAGAAGTCTTTCCAATTCTGGTACCCAGTAGACCTCAGAGTGTCCGGAAAG
GATCTCATTCAGAATCATCTGACGTTCTATATTTACAATCACTGTGCAATGTGGGAGAAA
GAAGAAGACAAATGGCCAAAAGGGATCCGAGCAAATGGTCACCTCATGTTAAATTCAGCA
AAAATGTCCAAATCTGACGGAAACTTCTTAACACTATCTGAGAGTATCGACAAATTCAGT
GCCGATGGAATGAGACTGACTCTAGCTGACGCCGGAGACTCCGTTGAAGATGCTAACTTT
GTTGAAAGTACAGCCGATGCCGCTATTTTAAGACTTTACACTTTTATTGAATGGGTGAAG
GAGGTCATGGTCACTAAATCAAACTTCAGGACAGGAGAGTACAATTTCCATGATAAAGTT
TTTGTCAGTGAAATGAACACAAAAATTATTCAGACTGATGATAACTACAACAAACTGCTG
TTCAAGGAGGCCTTGAAAACTGGTTTCTTTGAGCTTCAGGCTGCCAGAGATAAATATAGG
GAGTTGTGTTCCGAGGGAGGCATGCACGAGAGCCTTATAACACAGTACATTAGCACCCAG
GCGAAACTCATTTCACCAATATGCCCGCATGTCGCTGAACATGTTTGGGAACTACTTGGT
AATAAAGGTAGCATTCTTCATGAAAGATGGCCAGTTGCTGGAGAAGTGGATGAGATAGCA
GTGAAAGCGAGCAACTATCTCATGGAAGCGGCTCACTCCTTCCGAGTTTATCTCAAAAAT
CATTGTGCTGTCAAAAAACCAAAGAAAGGAGAAGTCGTCAAACAGGAGTCTAAACCGAAC
AAAGCTGTTATATGGGTGGCCAAGGAATATCCTAAATGGCAACATATTATTTTGAGCACA
CTTAAAGAAATGCATGGACCAAATGGTCTTCCCGATAACAAAACAATATCCAGCAAGTTA
GCAGAAATAAATGATCTGAAAAAGTATATGAAGAGGGTTATGCCGTTTGTTCAGGCGACC
AGAGAGAACATAGAGCGTATTGGCCTTGAAGCTCTCCGCGTGGGATTGGCGTTTGATGAA
GCGGCTGTACTACAGGATAATGCACAGTATTTAAGAGATACCCTCGATCTAGAGTACATA
GAAATTAAATTGGTAGATGAGGACGCTCCAGAACGGACTCGTACTGAATGCGCTCCCGGG
TCACCTCACGCCAGCTTCTTCACACATGTGACCCCGGCGGCGGACGTCGTGTTACTGAAC
CCCGACCAGCGCTCGGGTCTGTTCACAGTTAGCCTGAAGTTAGGGGAGGGGGAAACACTT
GATTCCCTTAAGGAGAAGTTGGCGAAACAAGTCAAGGGGATACGAGATATGGATGCGCTT
AAAATTTGGCGATACAAGGACCCGGTCCTCGGACCACGAAAGATTCCCGTCATAGGGGAT
TACGTCACCAAGTGTGTTGTGTTGGGAGCCGGCTCTGCGTTCAATGTTGACGTTGACAAG
AACATAATTGAACTGGTTAATAACGGAACCAATATTAATGTCGGCAACCAACTGCTGTAC
ACATACGACAACTAA
Protein sequence:
MEAPDDGKDYEKFLCTFPYPYMNGRLHLGHTFSLSKCEFATRYYRLKGRKVLFPFGFHCT
GMPIKACADKLKREMALYGCPPIFPDDEIVEEKEQGDIVPKDKSKGKKSKAVAKTGAAKY
QWQIMQSIGVPEEEIKEFANESYWLEYFPPRAVADLKRMGIHVDWRRKFITTDANPFYDS
FIRWQFHHLKQRNKIMYGKRYTIFSPLDKQPCMDHDRSTGEGAGPQEYTLIKMEVLEPFP
EVLKQFQGKTLNFVAATLRPETMYGQTNCWVHPEIKYIAFETVKHGVFICTRRAARNMSY
QGFTEKDGEYKIIAEIVGLDLLGVALKSPFTCYQKIYSLPMLTIKEDKGTGIVTSVPSDS
PDDYAALVDLQKKAPFREKYGIQDYMVMPFKPVSILEIPEFGNLTAVFLYDKLKIQSQND
KDKLTQAKEMAYLKGFYDGVLLVGDYKGEKIQDVKKKLQQRLIDDNSAVIYYEPEKTIIS
RSGDECVVALCNQWYLDYGNAEWKGQAEKALAAMNTYHDEVRKNFQATLKWLHEYACSRT
YGLGTKLPWDTQWVIESLSDSTIYNAYYTISHYLQGDSFRGNVENDLKIKPEEMSIEVWD
YIFFKDAPIPKNTKISKNKLDLMKKSFQFWYPVDLRVSGKDLIQNHLTFYIYNHCAMWEK
EEDKWPKGIRANGHLMLNSAKMSKSDGNFLTLSESIDKFSADGMRLTLADAGDSVEDANF
VESTADAAILRLYTFIEWVKEVMVTKSNFRTGEYNFHDKVFVSEMNTKIIQTDDNYNKLL
FKEALKTGFFELQAARDKYRELCSEGGMHESLITQYISTQAKLISPICPHVAEHVWELLG
NKGSILHERWPVAGEVDEIAVKASNYLMEAAHSFRVYLKNHCAVKKPKKGEVVKQESKPN
KAVIWVAKEYPKWQHIILSTLKEMHGPNGLPDNKTISSKLAEINDLKKYMKRVMPFVQAT
RENIERIGLEALRVGLAFDEAAVLQDNAQYLRDTLDLEYIEIKLVDEDAPERTRTECAPG
SPHASFFTHVTPAADVVLLNPDQRSGLFTVSLKLGEGETLDSLKEKLAKQVKGIRDMDAL
KIWRYKDPVLGPRKIPVIGDYVTKCVVLGAGSAFNVDVDKNIIELVNNGTNINVGNQLLY
TYDN