New model in OGS2.0 | DPOGS200738  |
---|---|
Genomic Position | scaffold402:+ 26587-28858 |
See gene structure | |
CDS Length | 1566 |
Paired RNAseq reads   | 247 |
Single RNAseq reads   | 756 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001038 (2e-137) |
Best Drosophila hit   | CG10191 (1e-65) |
Best Human hit | POC1 centriolar protein homolog A isoform 1 (2e-75) |
Best NR hit (blastp)   | PREDICTED: similar to TUWD12 [Apis mellifera] (6e-87) |
Best NR hit (blastx)   | PREDICTED: similar to TUWD12 [Apis mellifera] (3e-85) |
GeneOntology terms    | GO:0042995 cell projection GO:0005814 centriole GO:0005932 microtubule basal body GO:0005737 cytoplasm GO:0005856 cytoskeleton |
InterPro families    | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site IPR011046 WD40 repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR020472 G-protein beta WD-40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat |
Orthology group | MCL13785 |
Nucleotide sequence:
ATGGAAAATAATTATATGTCTCTTGAACCTTCTTTAGAAAAACAACTTAAAGGGCATCGC
AAAAGTATAACATCATTATTTTTCAATCCTAATGAACAACAGTTAGCAAGTGGCTCTTTA
GATAATAGCATATTGTTATGGGATTTACGTGGGACGATGCGAAGTTACAGATTCCAAGGC
CACGATGAAGCTGTTATGGATGTAACATTTTCTCCAACGGGAAAATATATGGCTTCCGCC
TCTCGAGACAAAACTGTTCGTCTTTGGGTACCAACTGTAACAGGAAGTACTGGTACATTT
AAAGCGCATTCTCAGACTGTGCGATCCGTTCAATTTAGTCCCGACGGAACAAAGATAATA
ACAGCATCAGATGATAAAATTGTTAAGTTGTGGTCGAGTGAGAAACATAAGTTTTTGGCT
TCATTTGTTGGTCACACAAATTGGGTTCGTCGGGCTCGCATCTCTCAAGATGGATCACTG
ATAGCATCATGTTCTGATGATAAAACAACAAAATTGTGGAACATAGAAACTGGTGTATGT
ATAAATACATATAAAGATCAGAGCGCACATGGGTTACATCTGGCCTGGCATCCATCGAGT
TGCTATGTGGCTATTGGTACTTCTAAGGGAAATATTAAATTGTATGATGTTAGGACACAC
AATCTTGTACAATTCTACAGTATACACAATGATGCTGTCACACAGCTTGTCTTTCATCCG
AGCGGAAGTTATATATTAACTTCCAGTAAAGACGGGACCATGAAGATTCTTGACCTGCTG
GAAGGTCATCCAATATTTACATTAACGGGACACTCTGGGCCGATCAATGCCGTAGCATTC
TCTCCTAGTGGACAAAAATTTACCTCTGCTGGTGATGACAAGCTGGGTGTGAAGATGTGG
TATCAGTGCTATCACAACACTAAGTATCCTGTGAAAACTTTTGTCCACATTGATAATGAT
CCTCATGATTCTGTAAGAAGCATCAGCTTCCAAGATGCACCTAATGCAAACAGTACTATG
ATAGAACCTGGCGATAATCAAGTGAATGTGACAAGAACTGCTTCAAATGTCGTAAGAAAC
AACTCAAATTCTCAATTTCACGGGGATTGTCAATCTAGTGAATGTTCGTCATACAGTGTG
GGGCATATCAGCCATATTCCTCGTCAACCTCCTACACCGGCTACATATACAATTCCATCA
ATTGTCGACAAGTCGATTCAATTCCATAATGATGAAGACATCTTTGGTATGATCAAACTA
GGAGATGACGATGTATGTTATACAAGTGGTACTATTGAATGGGTAGGTCGTAAACGAAGC
TTCCCATTGAATAGTGGTTTTAAAATTCTAAGTCACAAAGAGACTAGTGAGCCGTTCTGT
AAGAGAAAGAAACAAGTTGAGAATGAAACTTACATCAGTGGTGTTAACAAATTAAAGGAG
TGCGATTGTGCTGATGTTTTGCCCACTGTGAATGCGATTGTAGATCATCTTAATGCGTTA
CACGAAGCGGTAGATCTTGTTGATTTACGACTCAACACATTGGAGGAAGCCGTGAATCCC
AATTGA
Protein sequence:
MENNYMSLEPSLEKQLKGHRKSITSLFFNPNEQQLASGSLDNSILLWDLRGTMRSYRFQG
HDEAVMDVTFSPTGKYMASASRDKTVRLWVPTVTGSTGTFKAHSQTVRSVQFSPDGTKII
TASDDKIVKLWSSEKHKFLASFVGHTNWVRRARISQDGSLIASCSDDKTTKLWNIETGVC
INTYKDQSAHGLHLAWHPSSCYVAIGTSKGNIKLYDVRTHNLVQFYSIHNDAVTQLVFHP
SGSYILTSSKDGTMKILDLLEGHPIFTLTGHSGPINAVAFSPSGQKFTSAGDDKLGVKMW
YQCYHNTKYPVKTFVHIDNDPHDSVRSISFQDAPNANSTMIEPGDNQVNVTRTASNVVRN
NSNSQFHGDCQSSECSSYSVGHISHIPRQPPTPATYTIPSIVDKSIQFHNDEDIFGMIKL
GDDDVCYTSGTIEWVGRKRSFPLNSGFKILSHKETSEPFCKRKKQVENETYISGVNKLKE
CDCADVLPTVNAIVDHLNALHEAVDLVDLRLNTLEEAVNPN