New model in OGS2.0 | DPOGS200743  |
---|---|
Genomic Position | scaffold402:+ 86528-89452 |
See gene structure | |
CDS Length | 2169 |
Paired RNAseq reads   | 358 |
Single RNAseq reads   | 952 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001041 (0.0) |
Best Drosophila hit   | U26 (4e-51) |
Best Human hit | acyl-CoA synthetase family member 4 (3e-40) |
Best NR hit (blastp)   | AMP dependent ligase, putative [Pediculus humanus corporis] (6e-66) |
Best NR hit (blastx)   | AMP dependent ligase, putative [Pediculus humanus corporis] (9e-69) |
GeneOntology terms    | GO:0005575 cellular_component GO:0003824 catalytic activity GO:0008152 metabolic process |
InterPro families    | IPR011047 Quinonprotein alcohol dehydrogenase-like IPR000873 AMP-dependent synthetase/ligase IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat |
Orthology group | MCL15507 |
Nucleotide sequence:
ATGATAGAAATACTTCTAGCATGTGTGAATGGAGCATCTCTTCTTATAGCTCCAGAGAAA
GCAGACATTCTTTTCGGAGACAATTTGTTAGCTTTGGGCGGAGAGCCTCTTAGTGGCATC
AACAGATTAAGAGAGCTAAAGGATATTGCTAATAAGACAAGAATATTTATGTTGTATGGA
GTCACAGAAATGTCATGCTGGGCCTGTGCTGCAGAACTAGACCTGAACAGAATACTTAAT
GACAGAGAAATACCCTTAGGTAACTGTCTCTCGGAAACGGAAATAATTGTTGAACCCACT
AACAAAAATAAAAACACTGGAAAAATTGTTTTAGTTAGCAAGACCAGGAAATGTTTGATT
TTAAATAAATCCGTTGGAACTGAAGAGACAAATTCATTGAAATTCATTGATACTGGAGAC
ATTGGTGAAGTTAGAAATGGTACAATTTACTATAGAGGGCGTACAGATGATGTTATCAAG
AGGTTTGGCCAAAAAGTTAGCTTACAGGAAATTCAGACAACAATTATGATGTGTCCCAGA
GTGAAGTCATGTTCCTGCATCTGGCTGCCCAAACCTATGCTGTTGGTTGTGTACTTTGCA
TCAGAAACATTAAACAGTCAGGAGCTGTCGGACTTCCTTAAATGTAAACTAGAGGAAAAA
CATTGGCCAGATAAAATTATTAAAGTTGATAGCATACCAACGAATCCTCATGGAAAGATT
TCAAAAAAAATATTACAACAAATGTTTGAAAAGTCACCACAGACTCTTCCAACGTTGGAC
TCTTTAAGAGTTTTGTTTTTAAAAGAACTGAAAGCTACACTGAGCAAAAACTTTACTTAT
GATCAGGTCAAGGAAAGCGATTTCTTTTCTGTTGGGGGTACTTCCTTCTTGGCCGTTTCA
ATGTGCAATAAGTTATCCCTGGCATGCCCTCAATTTGGAAAATTCATACTGCCTTATTTG
TTATCACATAATCGTAAAATAGATGACATTATGCAATTAGCCTCGCAAGAATTGGGCCTT
AAGGAAATTAAATCGAAAAAGAGGCTAAGGTCAGCCTCCTACACCGAGAGCATAGCATCG
GGGAGCCAAAAAAAGACTGTGAAAATTATGAATTCCCAAAATCCAATGGAATTTATTTTG
CTTTGGACGTTTGACACTGGTAAATGTGTTGATGCTTCCCCTACTTTATTCCAACATAAA
TTCAATCTATATATAACGGTTGGGAGTCATTCAGGAATGATTGTTGTCATTGATGCCATC
AGCGGAACTTGTCAAGGAAGTATAAAACTGAAATCTAGAGTTGAAGCGTCAGTGGTCTGT
TATAATGAAGCGCCGCTGTCAACTCCTTGTGGTGTGGTGGGCTCCTACGACGGAACCATT
ATTTGCTTTACTTTAGAATCGTGTAAAGAAAAATGGCGAATAAATATTGGCTCTATGATA
AAGAGCAAAGGCGTATGTTGCAAGGGCTGCCTGTACATAGCGTCGTACGACGGTAAAGTA
CGATGCATTGATATTAACTCAGGGCATGTAAAGGACGTGATCGAAGTATCCGATAAAGCT
ATATCGGCCGATTTGATGCTGGCTAAGAATAAGTTCATACTATTGGGTACATTATCTGCC
GTCTATGCTAGTATTAATACAGAGACTAAGTCTATAGTGTGGAGGGGTACACTTAGTAGT
CCGGTGTTCGCAGCGCCTGCGCTGTATGACGGTGATAAATACGTTATCATCGCCGAAGTT
AACGGTACCATACACTGTCGGACCGTGGAGAAAGGAATTAAAATTTGGAAGTATCAAGGT
GCAAAAGGGAATATATTTTCATCGATTTGTATCAAGGAATTAGATAAACTCAAATGGCAA
ATGACATTTGGCTGTCACGATAACAAAGTATACAGTTTAATCGTTAAGAATTTTCAGCCG
AGTTTGCAGTGGAAGGCGGAACTTTCGTCACCTATTTACGCAACCCCGCGAATATTGAGC
GACAAGTTACTATTGACAGCTGCCAATAATGGGACATTGTGTATTTTAGATTCAGACACT
GGCATAACACTCACAGAGTATAAACTCCCCAATGAAACGTTTTCGACACCAGCAATTTAT
GGCGATTATATATTTATCGGATGTAGAAACGATCACGTATTCTGCATCAAATATGTTATG
AATATATGA
Protein sequence:
MIEILLACVNGASLLIAPEKADILFGDNLLALGGEPLSGINRLRELKDIANKTRIFMLYG
VTEMSCWACAAELDLNRILNDREIPLGNCLSETEIIVEPTNKNKNTGKIVLVSKTRKCLI
LNKSVGTEETNSLKFIDTGDIGEVRNGTIYYRGRTDDVIKRFGQKVSLQEIQTTIMMCPR
VKSCSCIWLPKPMLLVVYFASETLNSQELSDFLKCKLEEKHWPDKIIKVDSIPTNPHGKI
SKKILQQMFEKSPQTLPTLDSLRVLFLKELKATLSKNFTYDQVKESDFFSVGGTSFLAVS
MCNKLSLACPQFGKFILPYLLSHNRKIDDIMQLASQELGLKEIKSKKRLRSASYTESIAS
GSQKKTVKIMNSQNPMEFILLWTFDTGKCVDASPTLFQHKFNLYITVGSHSGMIVVIDAI
SGTCQGSIKLKSRVEASVVCYNEAPLSTPCGVVGSYDGTIICFTLESCKEKWRINIGSMI
KSKGVCCKGCLYIASYDGKVRCIDINSGHVKDVIEVSDKAISADLMLAKNKFILLGTLSA
VYASINTETKSIVWRGTLSSPVFAAPALYDGDKYVIIAEVNGTIHCRTVEKGIKIWKYQG
AKGNIFSSICIKELDKLKWQMTFGCHDNKVYSLIVKNFQPSLQWKAELSSPIYATPRILS
DKLLLTAANNGTLCILDSDTGITLTEYKLPNETFSTPAIYGDYIFIGCRNDHVFCIKYVM
NI