| New model in OGS2.0 | DPOGS212029 |
|---|---|
| Genomic Position | scaffold221:- 5796-29265 |
| See gene structure | |
| CDS Length | 2250 |
| Paired RNAseq reads | 669 |
| Single RNAseq reads | 1731 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010185 (0.0) |
| Best Drosophila hit | trachealess, isoform B (1e-176) |
| Best Human hit | neuronal PAS domain-containing protein 3 isoform 2 (1e-97) |
| Best NR hit (blastp) | trachealess [Bombyx mori] (0.0) |
| Best NR hit (blastx) | trachealess [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006350 transcription GO:0045449 regulation of transcription GO:0005634 nucleus GO:0003677 DNA binding GO:0030528 transcription regulator activity GO:0006355 regulation of transcription, DNA-dependent GO:0007165 signal transduction GO:0007610 behavior GO:0007626 locomotory behavior GO:0004871 signal transducer activity GO:0042711 maternal behavior GO:0035176 social behavior |
| InterPro families | IPR000014 PAS IPR013655 PAS fold-3 IPR013767 PAS fold IPR001610 PAC motif |
| Orthology group | MCL10679 |
Nucleotide sequence:
ATGCTGCCTCTACCGGCGGCCATCACCAGCCAGTTGGATAAGGCTTCCATCATACGACTG
ACGATCAGCTACCTCAAGTTACGAGACTTCTCCGGTCACGGTGACCCTCCATGGAGTCGC
GACACCCCACCGACTAGCAAGACTTTAAAAGGAACTCAGAATAGAAGGACCCCAGCCGGA
CTCGCTATGGAGCTGTTTGAACAGCATCAGGGAACACATATCCTACAGTCCCTGGATGGG
TTCGCTCTGTCGGTGGCTGCGGACGGGAGATTCCTCTATATATCCGAAACAGTGTCAATA
TACTTAGGTCTATCACAAGTAGAAATGACTGGCAGCAGTATATTCGACTACGTACACCAG
GCTGATCACGCGGAGATAGCGGAACAGCTTGGCCTATCACTCGCAGGAAGAGGAGGGGCT
GGTTTGAGTAGCCCAGCATCAGGTAGCGAGGAGGGCAGTCAGCATGGAACAAACAACCCT
GATGTATCGGCACAAATGACGCTAGCTGCTAGTGGGGCGTTGTTCCGAGGCATGGACCGT
GCTTTTTGCGTGAGAATGAAGAGTACTCTCACAAAACGTGGCTGTCATTTCAAATCTTCT
GGATACAGGGTGGTGCTTATGCTATGTCGTCTTCGGCCACAGTATACGTTCTCTCACAGT
CGCAAGACACCACCGACCCTGCTCGGGATGGTGGCACTAGCCATCGCCTTACCACCACCA
TCAGTTCATGAGATCAGGCTAGAGTCAGATATGTTCGTTACAAGAATTAATTTTGACTTC
AGGATAGCGCATTGCGAGCCCAGCCGAGTGTCAGAACTTCTGGGATATACAGCCGAGGAG
CTTACAGGGAAGAATCTCTACGCGCTCTGCCACGGAGAGGACGCCAACAAACTAAGAAAA
TGCCACGTAGACTTATTAAACAAGGGCCAAGTACTCACCCACTACTACAGGATAATGAAC
AAGTTGGGTGGTTACACCTGGATGCAGACCTGCGCTACCGTCGTCTGCTCCTCGAAGAAC
GCTGAAGAACAGAACATCATATGTGTCAACTACGTTATTAGTGGCCGCGAATATCCGAAC
ACGGTTATGGACTGTTGCCAATTGGAAGAGAGCGTTCAAGGTGTAAAACGAGAAGAGACG
ACCGGTGATCCAGAGAACGGTCCGCCAGATGCTGACTCTGGAGGAGGTCCGCCACCTCCG
CGACACCCCGCCGAGAGAACTGAACCGCCGTCTAACAACGACGCGACCTCATCAGCGCCA
CCAACCTCTGATGTTACACACCTAACAAGACTGAGCGACTCGCAGCCTCTCCCACTACAC
ACGACCCAAGAAAGGTCCTCGCCAATGCCAAGAAGACTGAAGAAGAGAAAACATACAGAA
GACGATGATGCAGAGAGAGATGAAGAGAGACGAAAAAGTTCTTCAAATTCCACAGCTGCA
TTGTCGCCCGTGGAACGTGATATGACCAAAGCGAATTTATCGATTCCGGAAACATCGGAC
GCGACATCAGTCCGAGATTTAGAAAACGCCATGTCGAAGCATTTGCCGTCCTTAGATGGT
AAAGAGATTTCGCATCGACCGACAGATTTTTCAACAGATGCGTTGCTGAAACAACAACAA
CAAAAGTCTACTATTCAGTGGATCGGTGCTCAAAATCATCATCTAAACCATCTCAACCGT
CAATTGCCAGGAAACCATACACCAACACCAGCATCAGCATTGTTAAGGCAGTTGTACGCA
AATCGAGAAAGTGTAATACGAAGTAACTTCCTAGGTGATGGAAGGACAGGAGGATATTAC
TCGAGCGATGGTCAATCAGGCCCGTTACCCACACCACCAGGCAGTGAAGGGTCAGGATAC
GGTGAACAGTTGGGTCATAAAGGCACGGACATCGGGTCGTTAGCATATGCGGGTTATGCT
GATTATCATTCCGCCATGACCCCACCTGGGTCGGTGTCACCCAGAGATAAACAACAATAC
GCACTGCCATATGACAATTCATATTCTGAAGCGTTAAGGCATCCCTATTTGGGGATAAAT
TCTGAAGCACCTCTGCCGTTGAAACCTCAAGCGTATTCGGCTGTTCCGGGTGCTTTGGAC
TACGCTCAGTTAGACCAGTCGCAATTCTTCCATCCATCTTCCTCTTTCCATCTCTATCAT
CCCCAGGCTCACGCCGCTCATGCCTCTCACTCGCACCAAACTGATAAATCCGCTCCGCCG
AATACTAATTGGTATTCAACCAGCTCATAG
Protein sequence:
MLPLPAAITSQLDKASIIRLTISYLKLRDFSGHGDPPWSRDTPPTSKTLKGTQNRRTPAG
LAMELFEQHQGTHILQSLDGFALSVAADGRFLYISETVSIYLGLSQVEMTGSSIFDYVHQ
ADHAEIAEQLGLSLAGRGGAGLSSPASGSEEGSQHGTNNPDVSAQMTLAASGALFRGMDR
AFCVRMKSTLTKRGCHFKSSGYRVVLMLCRLRPQYTFSHSRKTPPTLLGMVALAIALPPP
SVHEIRLESDMFVTRINFDFRIAHCEPSRVSELLGYTAEELTGKNLYALCHGEDANKLRK
CHVDLLNKGQVLTHYYRIMNKLGGYTWMQTCATVVCSSKNAEEQNIICVNYVISGREYPN
TVMDCCQLEESVQGVKREETTGDPENGPPDADSGGGPPPPRHPAERTEPPSNNDATSSAP
PTSDVTHLTRLSDSQPLPLHTTQERSSPMPRRLKKRKHTEDDDAERDEERRKSSSNSTAA
LSPVERDMTKANLSIPETSDATSVRDLENAMSKHLPSLDGKEISHRPTDFSTDALLKQQQ
QKSTIQWIGAQNHHLNHLNRQLPGNHTPTPASALLRQLYANRESVIRSNFLGDGRTGGYY
SSDGQSGPLPTPPGSEGSGYGEQLGHKGTDIGSLAYAGYADYHSAMTPPGSVSPRDKQQY
ALPYDNSYSEALRHPYLGINSEAPLPLKPQAYSAVPGALDYAQLDQSQFFHPSSSFHLYH
PQAHAAHASHSHQTDKSAPPNTNWYSTSS