| New model in OGS2.0 | DPOGS212045 |
|---|---|
| Genomic Position | scaffold221:+ 132927-136662 |
| See gene structure | |
| CDS Length | 1332 |
| Paired RNAseq reads | 97 |
| Single RNAseq reads | 645 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010193 (7e-88) |
| Best Drosophila hit | CG31548 (7e-47) |
| Best Human hit | 17-beta-hydroxysteroid dehydrogenase 14 (7e-20) |
| Best NR hit (blastp) | short-chain dehydrogenease/reductase [Bombyx mori] (2e-66) |
| Best NR hit (blastx) | short-chain dehydrogenease/reductase [Bombyx mori] (4e-55) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0003824 catalytic activity GO:0008152 metabolic process GO:0055114 oxidation reduction GO:0005488 binding GO:0005575 cellular_component |
| InterPro families | IPR004210 BESS motif IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain IPR020842 Polyketide synthase/Fatty acid synthase, KR |
| Orthology group | MCL40509 |
Nucleotide sequence:
ATGGATTTCACAAATAAAGTAGTAGTTATAACTGGAGGAAGTTCAGGTATAGGAGCTGCT
ACAGCGATTTATTTTTCAAAACTTTCAGCACAATTAGTTTTAGTAGGTAGAAAAGAAAAC
AATCTCAAAAAAATCTCCTTGTATTGTGAAAAAGCTAAAGCAGTTAAGCCATTGCCTATC
GTAGCAGATTTAACTGAAGATTCGGACGTGGAAAGAATCGTTACAGAAACTATAGACCAT
TTTGGAAAGATCGACGTTCTGATTAATAATGCTGGCGTTATGTCAATGGGAGGACTTAAG
GAATCTAATATGGAAATGTATGACAAAGTTATGTCAACGAATATTCGTGCAGTATATTAT
TTAACCAAACTTTTTACTCCACATCTAATAGAAAGCAAGGGTTGTATTGTAAATGTTTCA
AGTATTCTTGGAAGTAAAGTTACAACAAACGCCTTGGCATACAATATGTCAAAAGCTGCA
TTGGATCACTTCACAAAATGTGTCGCTTTGGAACTGGGACCAGATGGTGTAAGAGTAAAC
TCTGTAAATCCAGGTTTTGTGAAGACCAATCTCTTGAAAGATGTTGGGCTTTCTGAAGAT
CAACTTGAAATGTTGATGAAAAATATTGTGTGTAGAAATCCATTGAAACGACAGGTGGAA
GGTGATGAAGTCGCTGCTCTGATTGCATTTCTTGCTAGTGATAAAGCAAAAAGTATGACT
GACAAGAAAAACAAGCCATTACAGTTCTTTATGAAACCTGAAAAACTAAGTCCTCAAGAA
CCGTCTAAGAAAAGATCAAAGAAATCCGAATACGAGGAACCGAAACAGAAAGAATACGAC
AAAAATGAGATGGATTTCGTTGAAGTGGATGAATGTAACGATCCTAGAATAATGAACGAG
GATGAAGCGTTCTTCGCGTCACTCCTACCCTCTGTCGTGAAGTACAATGAGGACGAAAGA
CTCGAATTCCGCATGGAAGTGTTGGCCATCATGAAACGGATAAAGGACAAACGGAAATGG
ACCAATGACGCCCGCGGCGGCGGCGCGGTGGTAGCGGCTGCCGGCGGGATGATGACGCAG
GCCAGCGAACCAGCGGACGAGAGCTCCGACGCCAGGGATGGTATTGAGCGCTTCTCCGAG
GCGGGCGGCGACGGTGCGTCCACGTCATTCTGCAACCATCCAACTGCTGAGCTGCCGCCC
GCTACAACATTGGGATTGGCGAGGGGAGGGGGAAGAGTGGAAGGGGGAGAGGGAGACGGC
GGGGGAGGGGGGGTAAGGCACCGTTACTCATCCGCTACTATGCCGCCACACCACCCTTGC
TGTCTCATATGA
Protein sequence:
MDFTNKVVVITGGSSGIGAATAIYFSKLSAQLVLVGRKENNLKKISLYCEKAKAVKPLPI
VADLTEDSDVERIVTETIDHFGKIDVLINNAGVMSMGGLKESNMEMYDKVMSTNIRAVYY
LTKLFTPHLIESKGCIVNVSSILGSKVTTNALAYNMSKAALDHFTKCVALELGPDGVRVN
SVNPGFVKTNLLKDVGLSEDQLEMLMKNIVCRNPLKRQVEGDEVAALIAFLASDKAKSMT
DKKNKPLQFFMKPEKLSPQEPSKKRSKKSEYEEPKQKEYDKNEMDFVEVDECNDPRIMNE
DEAFFASLLPSVVKYNEDERLEFRMEVLAIMKRIKDKRKWTNDARGGGAVVAAAGGMMTQ
ASEPADESSDARDGIERFSEAGGDGASTSFCNHPTAELPPATTLGLARGGGRVEGGEGDG
GGGGVRHRYSSATMPPHHPCCLI