New model in OGS2.0 | DPOGS212045  |
---|---|
Genomic Position | scaffold221:+ 132927-136662 |
See gene structure | |
CDS Length | 1332 |
Paired RNAseq reads   | 97 |
Single RNAseq reads   | 645 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010193 (7e-88) |
Best Drosophila hit   | CG31548 (7e-47) |
Best Human hit | 17-beta-hydroxysteroid dehydrogenase 14 (7e-20) |
Best NR hit (blastp)   | short-chain dehydrogenease/reductase [Bombyx mori] (2e-66) |
Best NR hit (blastx)   | short-chain dehydrogenease/reductase [Bombyx mori] (4e-55) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0003824 catalytic activity GO:0008152 metabolic process GO:0055114 oxidation reduction GO:0005488 binding GO:0005575 cellular_component |
InterPro families    | IPR004210 BESS motif IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain IPR020842 Polyketide synthase/Fatty acid synthase, KR |
Orthology group | MCL40509 |
Nucleotide sequence:
ATGGATTTCACAAATAAAGTAGTAGTTATAACTGGAGGAAGTTCAGGTATAGGAGCTGCT
ACAGCGATTTATTTTTCAAAACTTTCAGCACAATTAGTTTTAGTAGGTAGAAAAGAAAAC
AATCTCAAAAAAATCTCCTTGTATTGTGAAAAAGCTAAAGCAGTTAAGCCATTGCCTATC
GTAGCAGATTTAACTGAAGATTCGGACGTGGAAAGAATCGTTACAGAAACTATAGACCAT
TTTGGAAAGATCGACGTTCTGATTAATAATGCTGGCGTTATGTCAATGGGAGGACTTAAG
GAATCTAATATGGAAATGTATGACAAAGTTATGTCAACGAATATTCGTGCAGTATATTAT
TTAACCAAACTTTTTACTCCACATCTAATAGAAAGCAAGGGTTGTATTGTAAATGTTTCA
AGTATTCTTGGAAGTAAAGTTACAACAAACGCCTTGGCATACAATATGTCAAAAGCTGCA
TTGGATCACTTCACAAAATGTGTCGCTTTGGAACTGGGACCAGATGGTGTAAGAGTAAAC
TCTGTAAATCCAGGTTTTGTGAAGACCAATCTCTTGAAAGATGTTGGGCTTTCTGAAGAT
CAACTTGAAATGTTGATGAAAAATATTGTGTGTAGAAATCCATTGAAACGACAGGTGGAA
GGTGATGAAGTCGCTGCTCTGATTGCATTTCTTGCTAGTGATAAAGCAAAAAGTATGACT
GACAAGAAAAACAAGCCATTACAGTTCTTTATGAAACCTGAAAAACTAAGTCCTCAAGAA
CCGTCTAAGAAAAGATCAAAGAAATCCGAATACGAGGAACCGAAACAGAAAGAATACGAC
AAAAATGAGATGGATTTCGTTGAAGTGGATGAATGTAACGATCCTAGAATAATGAACGAG
GATGAAGCGTTCTTCGCGTCACTCCTACCCTCTGTCGTGAAGTACAATGAGGACGAAAGA
CTCGAATTCCGCATGGAAGTGTTGGCCATCATGAAACGGATAAAGGACAAACGGAAATGG
ACCAATGACGCCCGCGGCGGCGGCGCGGTGGTAGCGGCTGCCGGCGGGATGATGACGCAG
GCCAGCGAACCAGCGGACGAGAGCTCCGACGCCAGGGATGGTATTGAGCGCTTCTCCGAG
GCGGGCGGCGACGGTGCGTCCACGTCATTCTGCAACCATCCAACTGCTGAGCTGCCGCCC
GCTACAACATTGGGATTGGCGAGGGGAGGGGGAAGAGTGGAAGGGGGAGAGGGAGACGGC
GGGGGAGGGGGGGTAAGGCACCGTTACTCATCCGCTACTATGCCGCCACACCACCCTTGC
TGTCTCATATGA
Protein sequence:
MDFTNKVVVITGGSSGIGAATAIYFSKLSAQLVLVGRKENNLKKISLYCEKAKAVKPLPI
VADLTEDSDVERIVTETIDHFGKIDVLINNAGVMSMGGLKESNMEMYDKVMSTNIRAVYY
LTKLFTPHLIESKGCIVNVSSILGSKVTTNALAYNMSKAALDHFTKCVALELGPDGVRVN
SVNPGFVKTNLLKDVGLSEDQLEMLMKNIVCRNPLKRQVEGDEVAALIAFLASDKAKSMT
DKKNKPLQFFMKPEKLSPQEPSKKRSKKSEYEEPKQKEYDKNEMDFVEVDECNDPRIMNE
DEAFFASLLPSVVKYNEDERLEFRMEVLAIMKRIKDKRKWTNDARGGGAVVAAAGGMMTQ
ASEPADESSDARDGIERFSEAGGDGASTSFCNHPTAELPPATTLGLARGGGRVEGGEGDG
GGGGVRHRYSSATMPPHHPCCLI