| New model in OGS2.0 | DPOGS212047 |
|---|---|
| Genomic Position | scaffold221:+ 170834-184991 |
| See gene structure | |
| CDS Length | 4749 |
| Paired RNAseq reads | 2969 |
| Single RNAseq reads | 6858 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010194 (3e-100) |
| Best Drosophila hit | Ino80 (0.0) |
| Best Human hit | putative DNA helicase INO80 complex homolog 1 (6e-179) |
| Best NR hit (blastp) | PREDICTED: similar to CG31212-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG31212-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0004386 helicase activity GO:0003677 DNA binding GO:0005524 ATP binding GO:0005634 nucleus GO:0031011 Ino80 complex |
| InterPro families | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR020838 DNA binding domain, INO80 IPR000330 SNF2-related |
| Orthology group | MCL14225 |
Nucleotide sequence:
ATGTCTGAAAAGTCTTTAGTGGGAAAAACGGCGTTAAAGCGTCATGAAGTTGCAAGACCT
ATACACATTCAAAGACTAGAGGCAGCTCTAGACATAAGACCCTTCGTAAATCAAGTGGAA
GGGATACTGAATTCTGATGGGGACTCTGACAGTGAAGAAGATTCAGATGGCAAGTCTATG
GCAAATGAAATGTCCAAAGGTGATAAGGACATGCATGGTGTTGTAACTACAAGACAAGAG
AGGCAAAGCGATCAATTAAGACTATATAATTTGTCATCTGTGGGCGAGGAGAGGCAATGG
TTAAGAGATGTCCTGCTGTCATCGGAATCGGAATCAAGTAGTGAAGATGATACACCAGCT
GCTAAGGAAAGAAGGATAAAACTGTTACTTAAAGAGAGATATTTTCATAATAAATATGCA
AAGAGTTACTATAAGGATTCGGGGAACTCCCGCTACATGTACTATGGTGCGGGGTTATTA
TCTACTATCGACCGTTATCCTGAGCGGAGGATCAGTAGGCCTTTGCCCCCCGCACGAGGG
CGCCGTGGCCGACCGGCCGAGCGGGGCTCCTCTAGGGGCCTCCAACGAAACAGGCGCGGC
CGCGCCAAAGAGGGCCGTACTGACGGTAGCGATGCTCCAGATGGCGTTGATTGGGAGGAA
CAACTTCGTAATCTCAAAGAGGAAAATGATACAGATGAATTTACCATATCAGAGAAACCT
GGACCCAGAGGTCGCAAAAAGTTATCATCCTTGAAAAGCCCAGAAGCCTTAACGGCTAGA
CGGAGGCGACACTGGCAGCTTTTAGTTAAAAAGGAGCTTGGGAAAGTTCAGAGATCAAGG
ACCGCGACACACAGGGAACTCATGCTGCAAAGGAAAAGATTAGCTACACTTTGCTGCAAG
CATTGGAGGCATGTTGCAATGCAATCCCAGAAGAATATGAAGGAGACGGTATGGCGGTGT
AAGCGTCTAAGTCGGGAGATGCAGGCTTACTGGAGGAGGTATGACCGAGCTGAGAGAGAG
ACCAGGAGGAGGCTGGAGAGAGAGGCGGAGGAACAGAGAAAGATGGATGTGGAGCTGATG
GAAGCGAAACGACAACGTCGCAAACTTAACTTCCTGATCACACAGACAGAACTGTACGCT
CACTTCATGCAGCGGAAGTTGAACGCGACGGAAGACGTGGATGACGACACCGACCGGATA
TTGATGCAGTTGGACGAGGACAGAGATCCGAGGCTCTCGGCCATAGATAATTATGATAGT
GAGGCAATGAAAGAGTTGGCGTCGCGGAACGCCCGCGAGGCGTTTCAAGCGGAGAGGGCT
CGGACCTCCGCCCCGGAGGGAACAGACGAGAAAGAGAGACGGAGGGATCATGATCAACCA
GAAATATTCAGGGGCACGTTGAAAGGATACCAGCTGAAAGGAATGAACTGGCTCGCTAAC
TTATATGACCAGGGTATAAGTGGTATATTAGCGGATGAAATGGGTCTCGGTAAAACTGTC
CAATGCATAGCGTTTCTATGTCACGTGGCTGAGAGGCTAGGCGTGTGGGGGCCGTTCCTC
GTCGTGTCGCCCGCATCAACATTACACAACTGGCAACAGGAGATGCAGAGATTCGTTCCG
GATTTCAAAGTTGTTCCATACTGGGGCAGTCCGAGTGAGAGAAAGATCTTACGTCAGTTC
TGGGAACGCAAAGACCTGCACACACCGCAGGCTGCTTTCCACGTGGTGGTGACGTCATAC
CAGATTGTTGTATCGGATTTGAAGTATCTGAACAGAGTGTCCTGGCAGTACATGATATTG
GATGAGGCTCAGGCCATCAAGAGTTCAGCCAGCATGAGGTGGAAGCTGCTGCTAGGTTTC
AGTTGCAGGAATAGGTTATTGCTATCGGGTACACCAATACAGAACAGTATGGCGGAACTG
TGGGCGTTACTACATTTTATAATGCCTACGTTGTTCGACTCGCACGATGAGTTCAACGAG
TGGTTTTCAAAGGACATTGAGAGTCATGCAGAGAATAAAACGACCATAGATGAAAAACAT
CTATCACGACTGCACATGATTTTAAAACCTTTTATGTTGCGTCGGATAAAGAAGGACGTC
GAAAATGAATTGTCTGATAAAATTGAGATTATGGTACACTGCCCTCTGACGATAAGACAG
AAATTATTGTATATAGCTCTAAAGAAAAAAATTAAAATAGAAGAATTATTACATTACTCT
GTCGGAGGAGAGTCGGGTCATAGTGTAGATAAGAATTTCACCTCGAATCTTATGAATTTG
GTTATGCAATTTAGAAAGGTATGCAATCATCCGGAACTGTTTGAGAGAAGGGATGTCAGG
TCGCCTTTCGCCATGCAAGTCGACGATTATCATTTACCAAAGTTATTAGCTGAAGAATGT
ATCCTAGTGAGGTCCATACCATCCAAGCGACATCTGCTATACAACAAGTTGAGTGTCCTC
AACCCCGAGTACGTTCATCACAATACAGAGAGCTTCAGCTTCATGAGGTTCATGGATTTA
TCTCCCATGGACATGTATAGGATTATGCTGTGTGGATGGCTGTATACGATGTTACATATA
GAAGAATGTTTAGATAAATACGAAAAGCTTCGCCACAGACAGTTCTGGTGGAGGCGGATA
GAAGAGGCTGGTGTTAAAGAAGAACAGAGCACAGAAGATTTCGGCGACTATTTTGACAGA
GTTCATTTAAAACACTTATTACTTATCAGTCCGAATGGAGATACACTCAAGAGAAGGAAA
GAGGACTCTTTGTTATGGAGGGAATTTCTATTCACTGATCCTCTATGGGGAGAAGGAGGT
CCGTTTTACATTCACACCGAGCAAACCATACATTACATGCCTGAAACTGTCGAACATCGA
GGGCTACGGACGAGGAATATGAAGTGTGAGGCGCAGCCGGAAATGCTGAGCGAGATCAAG
ACGGAGGAAGGCGGTGTGGTCCCTGTGGAGCCCCGCGCGGCGGAGGCGGTGGAGTTCCCT
CACACGGAGCGTGCGCCCCGCGTTATGGAGCACCTTCAGACCCACATTCCGGCCTTCCTG
TGTACCGCACAGCAGAAGGCGAGTGCGCATTGTCGCGAAGCGTTCGCCAGCAGTCGTAGC
TGGGCGCACTCCCAAGAGAGACATCGGAGAGGAGAAAATGACGAGGGAGCGGCGCTACTA
CGACGACTGGTGGACGCCGCCCGCCCACCGCGGGGATGGGCGGAGCTACAAGTACCTGAT
AAAAACCAGTTAGTTAGCGACGCGGGTAAACTGACAGTACTAGACTCGTTATTGAAAAGA
CTGAAGGAGAGCGGGCATCGAGTCCTTATATACAGTCAGATGACGAAAATGATTGACTTG
CTAGAGGAATATATGTGGCACAGGAAACACAAATACATGAGGTTGGACGGGTCTAGCAAA
ATATCTGCAAGACGCGACATGGTCGCTGATTTTCAGGCTCGCGCAGATATATTCGTGTTC
CTGCTCTCGACTCGCGCCGGCGGTCTCGGTATAAATCTAACAGCTGCCGATACTGTCATA
TTCTACGATTCTGATTGGAATCCAACGGTGGACCAACAAGCTATGGACCGGGCTCACAGA
CTGGGTCAGACTAAACAGGTCACTGTGTACAGACTTATATGTAAAGGGACTATCGAAGAG
AGAATCATGCAACGAGCTAGGGAGAAGAATAAAAACCAGTTAGTTAGCGACGCGGGTAAA
CTGACAGTACTAGACTCGTTATTGAAAAGACTGAAGGAGAGCGGACATCGAGTCCTTATA
TACAGTCAGATGACGAAAATGATTGACTTGCTAGAGGAATATATGTGGCACAGGAAACAT
AAATATATGAGGTTGGACGGGTCTAGCAAAATATCTGCAAGGCGCGACATGGTCGCTGAT
TTTCAGGCTCGTGCAGATATCTTCGTGTTCCTGCTATCGACTCGCGCCGGCGGTCTCGGT
ATAAATCTAACAGCGGCCGATACTGTCATATTCTACGATTCTGATTGGAATCCAACGGTG
GACCAACAAGCTATGGACCGGGCTCACAGACTGGGTCAGACTAAACAGGTCACTGTATAC
AGACTTATATGTAAAGGGACTATCGAAGAGAGAATCATGCAACGAGCTAGGGAGAAGAGT
GAGATTCAAAGGATGGTGATCAGCGGTGGTAACTTCAAACCGGACACGTTGAAGCCGAAG
GAGGTCGTGTCGCTTCTATTGGACGATGAGGAGATTGAATTGAAATATCGTCAGAAATCC
GAGGAAAAGAAAAACGAAGAAAAGGAACGCAAAAGGAAGATGGGAGTGTTGCCAGTGCCA
TCATCCGTGGAGTCGAAGCGTCCTCGTGAGTCGTGTTCGGAGCCCGGAAGTCCGTTACAG
GTCGACGATGACAGCGACACCCTCGTTATGGATGACGCACATCCGCTACCGTATTCCCCT
CCGGTCCGGGGTAGTTGGTCGTCTCGTTGCCGGCGCGCGGGGTCTCGGCGCGGGCGACCG
CGTGGCTCCCGGCACGTGCCCCGGGACAGAAGACCGGACCCGCCCGCTGATAACGCTCAA
GCCGTTGCCGCTGGCGCTGCACTGCTGGAATCCGACGCTCCTTTAGAAGCCTTGGAGCCC
CCATCATGTGATCGGGGTCGCCGCGGCCCGGGCCGGCCTCGCCTAAGGACCTGTAGGCCT
CCAAGACCAGTCACCAGGAGACGCAGGGCCCGTGAGCCGCTCCTAGTACCATTAGCACCT
CCACCGTGA
Protein sequence:
MSEKSLVGKTALKRHEVARPIHIQRLEAALDIRPFVNQVEGILNSDGDSDSEEDSDGKSM
ANEMSKGDKDMHGVVTTRQERQSDQLRLYNLSSVGEERQWLRDVLLSSESESSSEDDTPA
AKERRIKLLLKERYFHNKYAKSYYKDSGNSRYMYYGAGLLSTIDRYPERRISRPLPPARG
RRGRPAERGSSRGLQRNRRGRAKEGRTDGSDAPDGVDWEEQLRNLKEENDTDEFTISEKP
GPRGRKKLSSLKSPEALTARRRRHWQLLVKKELGKVQRSRTATHRELMLQRKRLATLCCK
HWRHVAMQSQKNMKETVWRCKRLSREMQAYWRRYDRAERETRRRLEREAEEQRKMDVELM
EAKRQRRKLNFLITQTELYAHFMQRKLNATEDVDDDTDRILMQLDEDRDPRLSAIDNYDS
EAMKELASRNAREAFQAERARTSAPEGTDEKERRRDHDQPEIFRGTLKGYQLKGMNWLAN
LYDQGISGILADEMGLGKTVQCIAFLCHVAERLGVWGPFLVVSPASTLHNWQQEMQRFVP
DFKVVPYWGSPSERKILRQFWERKDLHTPQAAFHVVVTSYQIVVSDLKYLNRVSWQYMIL
DEAQAIKSSASMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPTLFDSHDEFNE
WFSKDIESHAENKTTIDEKHLSRLHMILKPFMLRRIKKDVENELSDKIEIMVHCPLTIRQ
KLLYIALKKKIKIEELLHYSVGGESGHSVDKNFTSNLMNLVMQFRKVCNHPELFERRDVR
SPFAMQVDDYHLPKLLAEECILVRSIPSKRHLLYNKLSVLNPEYVHHNTESFSFMRFMDL
SPMDMYRIMLCGWLYTMLHIEECLDKYEKLRHRQFWWRRIEEAGVKEEQSTEDFGDYFDR
VHLKHLLLISPNGDTLKRRKEDSLLWREFLFTDPLWGEGGPFYIHTEQTIHYMPETVEHR
GLRTRNMKCEAQPEMLSEIKTEEGGVVPVEPRAAEAVEFPHTERAPRVMEHLQTHIPAFL
CTAQQKASAHCREAFASSRSWAHSQERHRRGENDEGAALLRRLVDAARPPRGWAELQVPD
KNQLVSDAGKLTVLDSLLKRLKESGHRVLIYSQMTKMIDLLEEYMWHRKHKYMRLDGSSK
ISARRDMVADFQARADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHR
LGQTKQVTVYRLICKGTIEERIMQRAREKNKNQLVSDAGKLTVLDSLLKRLKESGHRVLI
YSQMTKMIDLLEEYMWHRKHKYMRLDGSSKISARRDMVADFQARADIFVFLLSTRAGGLG
INLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERIMQRAREKS
EIQRMVISGGNFKPDTLKPKEVVSLLLDDEEIELKYRQKSEEKKNEEKERKRKMGVLPVP
SSVESKRPRESCSEPGSPLQVDDDSDTLVMDDAHPLPYSPPVRGSWSSRCRRAGSRRGRP
RGSRHVPRDRRPDPPADNAQAVAAGAALLESDAPLEALEPPSCDRGRRGPGRPRLRTCRP
PRPVTRRRRAREPLLVPLAPPP