| New model in OGS2.0 | DPOGS215323 |
|---|---|
| Genomic Position | scaffold2394:- 67377-68648 |
| See gene structure | |
| CDS Length | 1272 |
| Paired RNAseq reads | 478 |
| Single RNAseq reads | 1334 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007961 (2e-06) |
| Best Drosophila hit | CG1316 (3e-37) |
| Best Human hit | RNA-binding protein 45 (2e-35) |
| Best NR hit (blastp) | PREDICTED: similar to CG1316-PA [Apis mellifera] (2e-58) |
| Best NR hit (blastx) | PREDICTED: similar to GA12086-PA [Nasonia vitripennis] (3e-56) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding |
| InterPro families | IPR000504 RNA recognition motif domain IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL12880 |
Nucleotide sequence:
ATGAAAGTTTTAAATAATGACAATAAACCAACAAAAGTTATGGTGGCTGTTAATAAAAAT
GAGAACCCTGCACAAAACGAAAATGTAGATAGATATAGGCGACTCTTCATCAAAGTCCAG
AAAGATGCTAGTGAATCTGAACTCAGGCACCACTTCTCAACATTTGGACAAATAGAGTCG
ATACACCTACAAAGAGACAAAGTGACTGATACATGTAAAGGTTTCGCATACGTCCAATAT
AAAACTTTCTATGATGCAGCTAAAGCTTTTGAAGAATGTGATAAGAAATATAGACCAGTA
TTTGCTACACCGAGAGACGATTTGAAAAGAAGCAGAAATTGCCTTGATATTGAGCATCAT
AATATTAACGGATATAGTAATACAAAGAATAATCATAATCATTACACTGACAGACACGGC
CAGCTGAAACCAGAATACAATAACGAAAATATGAATGGGACAATAACATGTAGCTCTTAC
GACTATAACACTATCTCAGTTAAATGTAGCCCACAAGTAGCCAAGAAGTACATAGAACAA
TTATTTAATGTTATACCTGGCATGGTTCAATTTCAATATTATTTGGACACATTTAATGGA
ATTTCCAAAGCCGTTATAACATACGAGGAAAGTAGATCTGCAGCACATGCAGTTGACAGG
TTGAATAAATTTGAATTTCCGTCTGGGGAGATACTAACTGTCAAGCCGGATAAGAATCCT
TTGGTCAAAGCTGCTAATGATCTCACAGATATTGTCAATAATTTTAGAAATGCTGTTGAT
TATGGTGCACCCGATATAAAACAACTGGCCGAAGCGATTGCTAAAGCGTCCACTTTAATA
AAAGCTTCGACGACAGGTCAGATTTATTCACCGAGAGATCAGCATGACTACAATTATTGT
GATGTTATTTTACCACCTCACAAACCGATGGCGGATAACAATAGCAGAGTTGCCCAAAGG
TTATTCATTATCTGCAAACCCCAGCCTCCGCCGATGTCGACTTTACAAGATGTGTTCTGT
CGTTTCGGAGATCTCATTAATGTTTCCACTATACCAAACAAGACATTCGGGTTTGTTAAA
TACGCCTCTGTGAATGCCGCACAGGAAGCAATGAGAGTTCTTAACGGAGCTACTGTCACT
GGTGTGAAGTTAAAAGTTTTAGAGGCTGATGAGAAGCCCAACAAGGAAGATAAAGTAGGT
CAAACGGAACAAGCAGAGAACACAGACTATGATATGGACAGCAAGAGAATGAGACTAGAC
GACAAAGACTAG
Protein sequence:
MKVLNNDNKPTKVMVAVNKNENPAQNENVDRYRRLFIKVQKDASESELRHHFSTFGQIES
IHLQRDKVTDTCKGFAYVQYKTFYDAAKAFEECDKKYRPVFATPRDDLKRSRNCLDIEHH
NINGYSNTKNNHNHYTDRHGQLKPEYNNENMNGTITCSSYDYNTISVKCSPQVAKKYIEQ
LFNVIPGMVQFQYYLDTFNGISKAVITYEESRSAAHAVDRLNKFEFPSGEILTVKPDKNP
LVKAANDLTDIVNNFRNAVDYGAPDIKQLAEAIAKASTLIKASTTGQIYSPRDQHDYNYC
DVILPPHKPMADNNSRVAQRLFIICKPQPPPMSTLQDVFCRFGDLINVSTIPNKTFGFVK
YASVNAAQEAMRVLNGATVTGVKLKVLEADEKPNKEDKVGQTEQAENTDYDMDSKRMRLD
DKD