New model in OGS2.0 | DPOGS208705  |
---|---|
Genomic Position | scaffold661:- 40728-75821 |
See gene structure | |
CDS Length | 888 |
Paired RNAseq reads   | 24376 |
Single RNAseq reads   | 74409 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003397 (1e-98) |
Best Drosophila hit   | ribosomal protein S8 (6e-76) |
Best Human hit | 40S ribosomal protein S8 (3e-79) |
Best NR hit (blastp)   | RecName: Full=40S ribosomal protein S8 (7e-103) |
Best NR hit (blastx)   | Ribosomal protein S8 [Plutella xylostella] (4e-102) |
GeneOntology terms    | GO:0003735 structural constituent of ribosome GO:0005622 intracellular GO:0006412 translation GO:0005840 ribosome GO:0009790 embryo development GO:0030529 ribonucleoprotein complex GO:0051726 regulation of cell cycle |
InterPro families    | IPR001047 Ribosomal protein S8e IPR018283 Ribosomal protein S8e, conserved site IPR022309 Ribosomal protein S8e/ribosomal biogenesis NSA2 |
Orthology group | MCL12936 |
Nucleotide sequence:
ATGTGCGAGCGTAACTCGTACAACTACATGTCTGGCTGCGTGCGTCGTGGGTCGCGCGTT
GCGTGCTCCGCGGTCCGTGGTCCGTGGTGCGTGCCGCCTGTACGGCGTCGTTCGCGGGAC
TGGCGCGCGGCGGCCGCGGCGGTGACGCCGGTGCCGGCGGCGGAGCGCGTCCCGCCTTCA
CCGCACATCGTCTTCTCATCCAGCACCGTCGCTGTAGTGGCGACGTCAAATCTTTTCTTT
CTGACCCAGCGCAAGATGGGTATCAGTCGTGATCACTGGCATAAGCGAAGGGCCACCGGT
GGCAAACGTGCGCCCATTCGCAAGAAGAGGAAATATGAGTTAGGTCGCCCGGCTGCCAAC
ACCAAGCTCGGTTCCCAGCGCATTCACTTAGTGCGTGCTCGCGGTGGTAACATCAAGTAT
CGTGCACTGCGTCTGGACACCGGAAATTTCTCGTGGGGTTCCGAATGTGCAACCCGTAAG
ACTCGCATCATCGATGTTGTTTACAATGCGTCCAACAACGAGTTGGTGCGTACCAAGACC
CTTGTCAAGAATGCTATCGTGGTTGTGGACGCCACACCATTCAGGCAGTGGTATGAGTCT
CACTACCTGCTGCCACTCGGCAGAAAGAAGGGCGCCAAGTTGGTATGTAATGCTTCTAAA
CACTATCTTGGTTTGTTCTTGCGCAGCAAGAAGACTGCCAAGAAATACCTGACAAGACAA
CGTCTAGCTAAGGTTGAAGCTGCTTTGGAGGAGCAGTTCCACACTGGACGTTTATTAGCA
TGTGTATCAAGTCGGCCCGGTCAATGTGGACGATCTGATGGTTATGTGCTGGAGGGCAAG
GAATTGGAGTTCTACTTAAGAAAGATCAAATCCAAGAGGGCTAAGTAA
Protein sequence:
MCERNSYNYMSGCVRRGSRVACSAVRGPWCVPPVRRRSRDWRAAAAAVTPVPAAERVPPS
PHIVFSSSTVAVVATSNLFFLTQRKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAAN
TKLGSQRIHLVRARGGNIKYRALRLDTGNFSWGSECATRKTRIIDVVYNASNNELVRTKT
LVKNAIVVVDATPFRQWYESHYLLPLGRKKGAKLVCNASKHYLGLFLRSKKTAKKYLTRQ
RLAKVEAALEEQFHTGRLLACVSSRPGQCGRSDGYVLEGKELEFYLRKIKSKRAK